Hibiscus syriacus (Rose-of-Sharon): 120149010
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Entry
120149010 CDS
T09559
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120149010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120149010
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120149010
Complex B
120149010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Nrap_D5
Motif
Other DBs
NCBI-GeneID:
120149010
NCBI-ProteinID:
XP_039017874
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MADSPSSIATLDNTTNSQSKPDSDNPNPSPAQSDPAPSSTTTTHLQPNPNPSAALVSPQP
PPSIPSYSTPQPISGAATAVPPAIPSFRPVPQFLPLHKFPAPGLQPPGVNSASGSVPPML
MQYQAPPGQVPNPALRPFAPIPNGYAAVPGAVPPGTMPPPGLLRYPSPYPAMTRPAFPPL
PPGTIGVIPTFSRPPVPGVHPIIPPIIRPSIPNVTPTEKPQTTVYIGKIAPSVDNDFMLS
LLHLCGSVKSWKRPSNGAPKSFGFCEFESAEGVLRALRLLSKFNIDGQELMVNVNQATKD
YLVKYVEKKTENEKKPNEASAAGSDKEGENAVDNEKNESSTISVENSKNGDSDNKEKNIV
DIANSGIVTDEDLEADRDASEKLAGMIEERLKTNPLPPPPPLTAPDAGKSNSDVDLVRND
GTEGKNDDETTSESKATTENDRPETSSPERRHDRSRDREQDHKKEKEREIERLERETERE
RMRKEREQRRKIEEAEREYEKFLRDWEQREKEKEKQRQYEKEREKERERKRKREICYDIE
EDDDDDSRKRLRRGVLEEKRRKRLREKEDDLADRLKEEKEMAEAKKRAEEEQLQLQQQRD
ALKLLSGRFENGAEKTALTEEASNESKDKAIEQHYERESSHENQIVGDENMQNASVDESN
TAFVSASDTQQSGNAPARKLGFGLVGSGKRTTVPSVFHEEEDDDAQKEKKMRPLVPIDYS
NEELGAVQPGAPSPNLVAAAEFAKRISNVNPKEEKPDSERERTKRSYDKSSRDKDRNNED
RNRNRDKTKEKIPDRDRDREHGHGKVKTTDNQKLLDAKQLIDMIPKTKEELFSYEINWNV
YDQHALHERMRPWISKKITEFLGEEEKTLVDYIVSSTQEHVKASQMLELLQSILDEEAEM
FVLKMWRMLIFEIKKVETGLALRSRS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctccctcctctatagcaaccctagataacaccaccaattcccaatctaaa
cccgattctgataacccgaatccgtcacctgcccagtccgatcccgctccttcctccacc
accacgacacacctccaaccaaaccctaaccctagcgctgctttggtatctcctcaacct
cctccctcgattccttcctactcgacgccccagccgatctctggagcggcaaccgccgtc
cctccggcgattccttccttccgtccggtaccgcagttcttgccgttacataaatttcca
gctcctggcttgcagccgcccggcgtgaattcggcttctggttctgttccgccgatgttg
atgcagtaccaagctcctccgggtcaggttccgaaccctgcccttagaccgtttgctcct
attccaaatgggtatgcagctgtaccgggagctgttcctccgggcaccatgcctcctccg
ggacttcttcgctatccttctccttacccagcaatgactcggcctgcattccctccactt
ccacctggaactattggtgtgattccaacattttcacggcctcctgttcctggtgttcac
ccaattattcctcctatcatcagaccatctattcccaatgttactccaacagagaagcca
caaactacagtttatattggcaagatagcaccatctgtggacaatgacttcatgctctct
cttcttcatctttgtggatctgtcaagagttggaaacgtccctctaatggggctccaaaa
agttttgggttttgtgaattcgagtctgctgaaggggttcttcgtgcattacgtctactt
agtaaatttaatattgacggacaagaattaatggtaaatgttaatcaagcaacaaaggat
tatctggtgaaatatgttgaaaagaaaactgaaaatgaaaagaaaccaaatgaagcttca
gctgcagggtctgataaagaaggtgaaaatgcagtagataatgagaagaatgaatcctcg
acaatttctgttgagaactcaaaaaacggtgacagtgacaacaaagaaaaaaatattgtt
gacattgccaactctggcattgttactgatgaagaccttgaggctgatcgagatgcttca
gagaagcttgctggcatgattgaggagaggttaaagaccaatcctctccctccacctcct
ccactaactgctcctgatgctggtaaatcaaattcagatgttgatctagtaagaaatgat
ggaactgaaggtaaaaatgatgatgagactaccagtgagagcaaagcgacaactgaaaat
gatcgaccggagacaagttcaccagaacgtaggcatgataggagtagagacagagagcaa
gatcataagaaggagaaggagcgtgaaattgaaagattagaaagagagacagagcgggaa
aggatgagaaaagagagggagcagagaaggaagattgaggaggcagagcgtgagtatgaa
aaatttcttagagattgggagcaaagagaaaaggagaaggagaagcagagacagtatgag
aaggagagggaaaaagagagggagcggaaacgaaagagggagatttgctatgatatagaa
gaggatgatgatgatgattcgagaaaaaggttgcgcaggggtgttttggaggaaaaaagg
aggaagaggttgcgggagaaggaggatgacttggctgatagactaaaagaagagaaagaa
atggctgaggccaagaaaagggcagaggaggaacagctgcaactgcagcagcaacgagat
gcattaaagcttttgtctggtcgctttgaaaacggagctgaaaagactgcattgactgaa
gaagctagcaatgagagtaaagataaggcaattgaacagcattatgagcgcgaatcaagt
catgaaaaccagatagttggtgatgagaatatgcaaaatgcttctgttgatgaatcaaac
acagcctttgtttctgcctcggatacacaacagagtgggaatgcaccagcaagaaagttg
ggttttggtcttgttggatctggaaagaggacgactgttccatctgttttccatgaggag
gaagatgatgatgcacagaaggagaagaaaatgaggcctctggttcccattgattactct
aatgaggaattgggggctgtccaacctggtgcaccttcaccaaatttggttgcagctgct
gaatttgcaaagcgaatatcaaatgttaatcctaaagaggaaaagcctgattcagaaaga
gagcgaaccaagcgttcatatgataaatctagtagggataaggaccgtaataatgaggat
agaaatcgcaacagagacaagaccaaagagaaaatccctgatcgggatagagacagggaa
catggacatggtaaggtgaaaacaaccgataaccagaagcttttggatgccaaacaatta
attgatatgattccaaagaccaaggaggaactattttcatacgagataaactggaatgtt
tatgaccagcatgcattgcatgagagaatgagaccctggatttcaaagaaaattacggag
ttcttgggagaagaagagaaaactctggttgattacattgtatcgagtactcaggaacat
gtcaaggcttcccaaatgctggagctgctgcagtctatattagatgaagaggcagagatg
tttgtgcttaagatgtggaggatgctgatatttgaaattaagaaagtggagactggtctg
gctttgcggtcgagatcctga
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