Hibiscus syriacus (Rose-of-Sharon): 120149641
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Entry
120149641 CDS
T09559
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120149641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120149641
Membrane trafficking [BR:
hsyr04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
120149641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
120149641
NCBI-ProteinID:
XP_039018302
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All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MKITALVVLKCNPEGSDPIILANATDVSRFGYFQRPSVREFIVFVSRTVAKRTPPDQRQS
VQHEEYKVHAYNRNGLCALGFMDDHYPVRSAFSLLNQVLDEYQKNFGESWRNAQADSTQP
WPYLNDALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcgttagtggtgttgaagtgcaacccggaaggatccgatccgattata
ctggccaacgcaactgatgtgagccgttttggttacttccaaaggccaagcgtcagggag
tttattgtcttcgtttctcgaactgttgctaaacgtacccctcccgatcagcgtcaatca
gtccaacacgaagagtacaaggttcatgcttacaacagaaatggactttgtgcattggga
tttatggatgatcattatcctgttcgaagtgctttttcgcttctcaaccaggtgttagat
gagtatcagaaaaattttggggagtcgtggagaaatgcgcaagcggatagcactcaacct
tggccctatctgaatgatgctttgaccaaatttcaggaccctgcagaggcggataaatta
ttgaaaattcagagggagttggatgaaactaaaatcatccttcataaaactattgatagt
gtgcttgctcgaggtgagaagctggacagtttggttgagaagagttcagacctgagtgct
gcatctcagatgttctacaagcaggctaagaaaaccaatcaatgttgtaccatactgtag
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