Hibiscus syriacus (Rose-of-Sharon): 120149788
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Entry
120149788 CDS
T09559
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsyr01001
]
120149788
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120149788
Enzymes [BR:
hsyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120149788
Protein kinases [BR:
hsyr01001
]
Serine/threonine kinases: Other
Other
120149788
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120149788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_THOC3
LisH
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
120149788
NCBI-ProteinID:
XP_039018423
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MDDMSSQAQPPNLNSNSNPNQNDNQNQTEGQQPAERDELRHQEGEEAEEDEEEEEEEGRK
EDDELMAKAQVLMEKITSSPDNPNPTVLHALASLLETQESLFRCLEENSPSSSNGRASHN
VGQLGNLIRENDEFFDLISSKFLSESRYSTSVQAAAARLLLSCSVTWIYPHVFEEPVLEN
IKAQVMNETPRSSIEDQNCKHDLTRNEASDAEILKTYSTGLLAVCLASGGQVVEDVLTSG
LSAKLMRYLRVRFLGEITACQNDALHLSDSKSLSGASFRSRDDGRGRIRQVLETTHIDGP
KLIDEKPLDVHCPEQDQKLPDGVGEGVYMHSVDADSEEIWHIQDISDGKLRHGEVDENGR
DESSRRKINLGSARSKGKVRTSEGIMENEQLLASLGSESRYGLAHSMRDRSSSKHLDVRR
VPEAKKGMGKTNADNLVVEREDNDECFQGCRVGSKDFSDLVKKAVRAAEAEAMAANAPVE
AIKAAGEAAAEVVKCAALEEFKTTNNEGAALLAASKAAATVVDAANAVEASRDSTSTSSD
PINKSVAEKEVNDDVEEYFIPNDELLAQLKERYCIQCLETLGEYVEVLGPVLHEKGVDVC
LALLQRSSKIEEASKATSLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRVPQNCF
GLSSCLFTIGSLQGIMERVCALPFDVVHQVVELAIQLLECPQDQVRKNAALFFAAAFVFR
AVLDAFDAQDGLQKLLGLLHDAASVRSGANSGTLGLSGTASFRNERSPSEVLTSSEKQIA
YHACVALRQYFRAHLLLLVDSIRPNKSNRNGARSIPSTRAAYKPLDISNEAMDAVFLQLQ
KDRKLGPAFVRTRWPAVEKFLSSNGHITMLELCQAPPVERYLHDLLQYALGVLHVVTLVP
ISRKMIVNATLSNNRAGIAVILDAANSASSLVDPEIIQPALNVLINLVCPPPSISNKPPL
PSQGQQLAPGQTTNGPSVETRSAERNILDRSVFLPNQSETRERSAESSLVDRGTAAGSQS
TSSIAQTPVSAASSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREVVRASNGIKVLLHL
LQPRIYSPPAALDCLRALACRVLLGLARDETIAHILTKLQVGKKLSELIRDSGGLTHGTE
QGRWQSELAQVAIELIAIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELL
LLIHEHLQASGLAETAASLLKEAQLTPLPSLAAPSSLAHQASMQDAPSIQLQWPSGRTPG
GFFSSRSKISVQDEDIKLKCDSTSSLKKKSLFFSPTFALQSINHFLSQDSQPPSVRKAHS
SSKPCPSLPSVSETRTESMIKSYLDSESNYRTPLVLPMKRKISELKDTGLTLSGKRLNTG
DHGPRSPICLTPNTTRRNFLLTDAPVLTPTSNLRDQNVRATPSSLIDLSDENLCGSSNVG
QMTPSSQVGLLNDPQPSNSERLSLDSIVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPMP
KRSLDAPTNITSRLGTREFRSAYGGVHGNCRDRQFVYSRFRPWRTCRDDVGSLLTCVCFL
GDSSHIAAGSHAGELKIFDSNSNNVLDSCSGHQFPVTLVQSYFSGETQMVLSSSSQDVRL
WDAFSFSGGAMHSFEGCKGARFSNSGSVFAALSSDSTQREILLYDIQTYQLELKLSDASA
NSTGRGHVYSPIHFSPSDTMLLWNGVLWDRRVPGPVHRFDQFTDYGGGGFHPARNEVIIN
SEVWDLRKFRLLRSIPSLDQTAITFNARGDVIYAILRRNLEDVMSAVNTRRVKHPLFAAF
RTLDAINYADIATIPVDRCVLDFATEPTDSFVGLITMDDQEEVFSSARVYEIGRRKPTDD
DSDPDDAESDEEEDDEDDIDIDPILGPDINREGESDADEMSSDDDSVSGLDDDDDDDGDF
IMDDGVGGILEIVTEGEDDDDSQLVESFSSGEEEDFGF
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatgtcgagccaagcgcagccgcccaatctcaattctaattccaatcccaat
caaaatgataatcagaatcaaacggaagggcagcaacctgcagaaagagatgagctgcga
caccaagaaggagaagaagcggaagaagacgaggaggaggaggaagaagaagggcggaag
gaagacgatgaattgatggcaaaagcgcaggttctcatggagaagatcacttcttctcct
gataaccctaatcctacagtgctccatgctctcgcctcccttctcgaaacgcaggagtct
ctttttagatgccttgaagaaaacagtccttcttccagcaatggtcgtgcctctcataat
gttggacagttagggaacttaatcagggagaatgatgagtttttcgatttgatatcatca
aagtttctttctgagagtagatattcaacctctgtccaggcagctgctgctagacttctt
ctaagctgttctgttacttggatttatcctcatgtttttgaagaaccggttttggagaac
atcaaagctcaggtaatgaatgagactcctagatcttctattgaagatcagaattgcaaa
catgacttgactagaaatgaagcctcagatgctgaaattttaaaaacctattccactgga
cttcttgcagtgtgtttggcgagtggtggtcaagtggtagaagatgtcctgacttctgga
ttgtctgctaagcttatgcgctatcttcgtgtgcgctttcttggggagattactgcatgt
caaaatgatgccttacatttgtctgacagtaagagcctatctggtgcttctttcagaagt
agagatgatggtcgagggaggattcggcaggttttagagacaactcatattgatggtccc
aaactaattgatgagaaacctttagatgtccattgtcctgaacaggatcaaaaactgcct
gacggggtgggtgagggggtttacatgcatagtgttgatgctgatagtgaggaaatatgg
catattcaagatattagtgatgggaaattgagacatggtgaagttgatgaaaatgggaga
gatgaatcctccaggcgcaagataaaccttggttctgcaaggtcaaagggtaaggtaagg
acttctgaggggattatggagaatgaacaattattagcttcactaggctctgaaagtcgt
tatggactggcacatagtatgagagacagaagttcatctaagcatttagatgtgagaagg
gtgccggaagcaaagaagggcatgggaaagaccaatgctgataatctggtagtggaaaga
gaggataatgatgaatgctttcaaggatgcagagttggaagtaaagatttttctgatttg
gtcaaaaaagcggttagagctgctgaagctgaagctatggcagccaatgcacctgttgaa
gccatcaaagcagctggtgaagctgcagctgaagttgtcaaatgcgctgctttagaggag
ttcaaaactactaacaatgaaggagctgcattattggctgcttccaaagcagcagctact
gttgttgatgctgctaatgccgttgaagcttcaagagactcgacttccacaagttctgat
ccaataaataaaagtgttgcagaaaaagaagtaaatgatgatgttgaggagtattttatt
cccaatgacgagctgcttgcccagttgaaagaaagatactgtattcagtgccttgagact
ttaggtgaatatgttgaagtccttgggcctgtactgcatgaaaagggtgtagatgtctgt
ctagccctgttgcaacgaagttccaagatcgaagaagcatctaaggctacttctctcttg
cctgatgtgatgaagctaatttgcgctttagcagcccatcggaagtttgctgctttattt
gttgatcggggtggcatgcaaaaactgcttgctgttccaagagttcctcaaaattgtttt
ggtctttcttcttgcctatttactataggttctctacagggaataatggaacgtgtctgt
gcacttccttttgatgttgtccaccaggtggttgagctagctatccaacttctagaatgc
ccccaggatcaagttagaaaaaatgctgcactattttttgctgctgcattcgtcttcaga
gcagtgcttgatgcttttgatgctcaagatggtttgcagaaattattgggccttctacat
gatgctgcctcagtaagatctggggcaaattcaggcacattaggcttgtctggaacagca
tcatttcgtaatgagagatcaccatcagaggttctgacttcttcagaaaagcagatagcc
tatcatgcatgtgttgctttgcggcaatacttcagagctcatcttcttttgcttgtggat
tcaatacgtccaaataaaagtaaccggaatggagcacggagtattccaagcaccagagct
gcatacaagccacttgacattagcaatgaggccatggatgctgtgtttttgcagttgcag
aaggaccggaagctgggtcctgcttttgtgaggactcgttggcctgctgttgagaaattc
ttaagctctaatggacatattaccatgttggaattgtgccaggccccacctgttgagcgg
tatctacacgacttgctacagtatgcattaggtgttctgcacgttgttactttggtgcct
atcagccgcaagatgattgtcaatgccactctgagcaataatcgtgctggcatagcagtt
attttggatgcagcaaatagtgccagtagtcttgtggaccctgagattatacagccggct
cttaatgtgttaattaaccttgtttgccctcctccttcaatcagcaacaaaccaccctta
ccatctcaaggtcagcagttggctcctggtcaaaccacaaatggtcccagtgtggaaaca
agaagtgcagagcgcaatattttggatcgatctgtttttcttcctaatcagagtgagaca
agggagcgaagtgcagagtctagtttggttgataggggcactgcagcaggcagccaatcc
accagcagtatagctcaaacacctgtttctgctgcttcatctggtttggttggagatcgg
agaatatccttaggtgctggggcaggatgtgctggccttgctgcacaattagaacaagga
tatcgtcaagcaagagaggttgtccgtgccagtaatggcataaaggttttactgcatctc
ctccaaccccgtatatattcacctcctgctgctttggattgtcttcgggcccttgcatgc
cgagtcttgcttggtttagctagagatgagacaattgcacatatattgactaagcttcag
gtgggcaagaagctgtctgaactgatacgagattcaggtggcctgacacacggaactgaa
caaggaagatggcaatccgaacttgcacaggtggcaattgagctgattgctattgtaaca
aattctgggcgtgcaagtacattggcagctacagatgctgctacaccaacattaagacgt
atagagagagctgctattgctgctgccactcctataacttaccattccagggagcttttg
ctgctcatacatgaacatctgcaggcatctggtctggctgaaactgcagcttcacttctg
aaagaagctcaattgactcctttgccatccttggctgccccttcctctcttgcacaccaa
gcctccatgcaagatgctccgtcaatacaactccagtggccctcaggtcgtacccctggt
ggattcttctccagcagatccaagatttctgtccaggatgaggatattaagttgaagtgt
gattcaacttcatctttaaagaagaaatcgctttttttctctcccacttttgcgttgcaa
tcaataaaccacttcctttctcaagattcccaaccaccatctgtcaggaaagcacacagt
agctcaaagccatgtccttctctgccaagtgtttcagaaactcggactgaatctatgata
aaaagttatcttgattcagaatcgaattataggactcctctagtgttgccgatgaaaaga
aaaatatctgagttgaaggatactggtttgacgttatccgggaagcgattaaacactggt
gatcatgggccaagatcccctatttgtctgacacccaatactactcgaaggaactttctg
cttacagatgctcctgtattgacaccaacttctaacctaagggatcagaatgttcgagca
acaccaagcagcttaattgatctgtcagatgaaaacctatgtggtagttctaatgtggga
cagatgacaccttcctcccaagttggacttctaaatgatccccaacccagcaactcggaa
cgtttaagtctcgacagtatagttgttcagtatctaaagcaccagcatcgtcagtgccct
gctcctataacaactcttccaccactttctcttttgcatccacatgtttgtcctatgccg
aagcgaagccttgatgctccaacgaacatcacttcccgacttggtacacgtgagttcagg
agtgcttatggcggagtccatggaaattgtagagatcgccagttcgtttacagtagattc
aggccatggagaacttgcagggatgatgttggcagtttgttgacatgtgtctgttttttg
ggggactcttcccatattgcagctggtagccatgctggggagctaaaaatctttgattct
aacagcaataatgtgctggacagctgctcagggcaccagtttcctgtaacacttgttcag
tcatatttttctggtgagacccaaatggttctatcatcaagctctcaggatgtgcggttg
tgggatgccttttctttctctggtggggcgatgcattcttttgaagggtgcaagggtgct
aggttcagtaattctgggagcgtttttgctgccctatcttctgattccacccagcgagaa
attctcctttatgatatccagacctatcagttggaattgaaactttctgatgcctcagct
aattctacaggtcgtggtcatgtatattctcctatccattttagtccatctgatactatg
ctgctttggaatggcgttttatgggatcggcgggttccaggtcctgttcatcgctttgat
cagtttaccgattatggtggtggtggttttcatcctgctaggaatgaggttataataaat
tccgaggtttgggatttgaggaagttcaggctacttcgaagcataccttctttagatcaa
acagcgataaccttcaatgcacgtggggatgtaatttatgcaatcctgaggagaaatctt
gaagacgtgatgtcagcagttaacacccgtagggtgaagcatcctctatttgctgctttc
cgtacattggatgccattaactacgctgatattgcaactattccagtggatcgatgcgtt
ctcgactttgcaacggaaccaacagattcctttgttgggctgattacaatggatgaccaa
gaagaggtgttttcatcggccagagtatatgaaattggtcgtcgaaagccaactgacgac
gattctgatcctgatgacgcagaaagcgatgaggaggaggacgacgaggatgatattgat
atagacccaatacttgggccagatatcaatagggagggtgagagtgatgctgatgaaatg
agcagtgatgatgatagtgtgagtggtcttgatgatgatgatgacgacgatggggatttt
atcatggatgatggtgtaggtgggatattggagattgtgacggaaggcgaggatgacgat
gacagccagttggttgaatcttttagcagcggtgaagaggaggattttggtttctaa
DBGET
integrated database retrieval system
