Hibiscus syriacus (Rose-of-Sharon): 120149882
Help
Entry
120149882 CDS
T09559
Name
(RefSeq) protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120149882
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120149882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_8
TPR_14
TPR_16
TPR_17
TPR_11
TPR_6
TPR_CcmH_CycH
TPR_9
TPR_7
ANAPC3
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
TPR_10
TPR_Slam
Fis1_TPR_C
NatA_aux_su
DUF6584
Motif
Other DBs
NCBI-GeneID:
120149882
NCBI-ProteinID:
XP_039018514
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETRQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVEQAFAAFKIVLEGDRDNVPALLGQACVEFNRGRYSD
SLELYKRTLQVYPNCPGAVRLGIGLCRYKLGQFQKARQAFQRVLELDSENVEALVALAIM
DLQANDAAGIEKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSFYNLARSYHSKGDFEKAGYYYMASIKEINKPVEFVFPYYGLGQVKLKSGDFRS
ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVEKAQEFMRKAAKIDPRDAQAFLDLGELL
ISSDTGAALDAFKTARNLLEKGSQAVPVEVLNNIGVLHFEREELELALESFNKALGDGVW
LALTGNKPKSYVIEASASILDYKDMQVFHRLEEDGIPVELPWNKVTVVFNLARLHEQLHN
TGIANILYRLILFKYPDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNDKCPNALSMLG
DLELKNDDWVKAKETLRSASDATNGKDSYGILSLGNWNYFAAIRNEKRNPKLEATHLEKA
KELYTRVLVQHTDNLYAANGAGVVLAEKGQFDVSKDIFTQVQEGASGSVFVQMPDVWINL
AHIFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA
PSNYTLRFDAGVAMQKFSTSTLQKDKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGF
DEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRKYL
LERRKQEDEQKRLQQAEEHFKRVQEQWKSSNPSRRRDRSEIDDEEGGHSEKKRRKGGKRR
RKDKNRSRYERDDEEPDMMDDREEMDDEDANRNYRESTTQMNDQDDDNGENPHDLLAAAG
LEDSDLEDDEAAVPSSAAGRRRQAWSESEDDEPSQRRSESSPVREDLAEQQESEGEIRED
NHKRNAGDALDDED
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgtgtacataccggttcaaaactcagaggaggaagtgcgagtggctctggat
caacttccccgggatgcttctgatattctcgatatcctcaaagccgagcaagctcctctc
gatctttggctcatcatcgcgagggaatactttaagcaagggaaggttgaacaatttcga
caaattctggaagaaggatccagtcctgaaatcgatgagtattatgccgatgttagatac
gagaggattgctatcctaaatgctttaggcgcttattacagctaccttggaaaaattgag
acaagacaaagagaaaaagaggaacattttattttggctactcagtattacaataaagca
tcaagaattgatatgcacgagccttcaacttgggttggcaaaggtcagcttctcctggca
aaaggtgaagtggaacaggcatttgctgcgtttaagattgtcttggaaggagatcgtgat
aatgttcctgctcttcttggccaggcatgtgttgagttcaatcgtggtcgttattctgat
tcattggagttatataagaggaccttgcaagtttatcctaattgtcctggagctgtcaga
cttgggattggtctctgtcgatataaattgggtcaatttcaaaaggctagacaggcattt
cagcgagttttagagttagactcagaaaacgttgaagctcttgttgcattggcaatcatg
gatttacaagcaaatgatgctgctgggattgagaaaggcatggacaaaatgcgtagagct
tttgagatatatccctattgtgcaatggcactaaattatctagcaaatcactttttcttc
actggacaacactttttagtcgagcaactgactgaaacagctcttgctgtcaccaatcat
ggaccaacaaaatcacattctttctacaatctagcacgctcttatcatagcaagggggac
tttgagaaagctggatactattacatggcatctattaaggaaatcaataagcctgttgaa
tttgtatttccctactatggcttgggacaagtgaaacttaagtcgggagattttaggagt
gcactttcaaactttgaaaaagttttagaggtttaccctgataattgtgagacattgaag
gctcttgggcacatatatgttcagcttggtcaggttgaaaaggcccaagaatttatgaga
aaggctgcgaaaattgatccccgggatgctcaggcatttcttgatctaggggaattgtta
atttcatctgacacaggagctgcccttgatgccttcaaaacggcacggaatcttctggaa
aagggaagtcaagctgtgccagtagaagtgctcaacaatattggcgttcttcattttgaa
agggaagagctcgagcttgccctggaaagctttaacaaggctctgggagatggtgtatgg
cttgctttaacaggaaataagccaaaatcctatgttattgaagctagtgcatctatcctg
gactacaaggatatgcaagtatttcataggctcgaggaagacggtattcctgtggaacta
ccctggaataaagtaacagttgtatttaaccttgcccgattacatgagcagctgcataac
acaggaatagcaaacatattgtatcgcttgatattgttcaagtatccagactacgttgat
gcttatttgaggctagctgccattgcaaaagctcgaaataatcttcaattaagcattgaa
ctggttaatgaggcactgaaagtgaatgacaaatgccccaatgcattatccatgcttggt
gacttggagctcaagaatgatgactgggtaaaagcaaaggaaaccttgcgttctgctagt
gatgcaaccaatgggaaggattcttatggtattctttctctggggaactggaactacttt
gcagcaattcgcaatgagaaaagaaatcccaagttggaagctacccatttggaaaaggcc
aaggaattgtacacaagggtccttgttcagcatacggataatttatatgctgctaatggt
gcaggagtagtgttggcagaaaagggccagtttgatgtttcaaaagacatttttacacag
gtccaagaaggtgcaagcgggagtgtttttgtccaaatgcctgatgtatggataaacttg
gcccatatcttcttcgctcaaggaaattttgctttagctgtaaaaatgtatcaaaattgc
ctgaggaagttctattacaatacagactctcaaattcttctctacctagctaggactcat
tatgaagctgaacaatggcaagaatgcaagaaaactttattgagagccatccacttagct
ccttcaaattacacactaaggtttgatgctggagtagcaatgcagaaattctcgacttcg
acactacagaaggacaaaaggactgcagatgaggttcgctcaacggttgcagagctagag
aatgccgttcgcatatttagtcaattatctgctgcatcaaaccttcatcttcacgggttt
gatgagaagaagattaacacacatgttgagtattgcaaacacttgcttgaagctgcaaaa
gttcaccgtgaagccgctgaacgtgaagagcagcagaacaggcagaaacaagaagcagct
cgtcagcttgcattggctgaggaagcccgtcgtaaggctgaagagcaaagaaaatatctg
ttggagagaagaaaacaagaagacgaacagaaaaggctccaacaggctgaggaacatttc
aagcgcgtgcaggagcaatggaagagtagcaacccttccaggcgaagggacaggtctgaa
atcgatgatgaagagggtgggcatagtgagaagaaaagaagaaaaggtggaaagaggaga
aggaaggataagaatagatcacgttacgagagagatgatgaggaacccgacatgatggat
gatcgggaagaaatggatgatgaagatgccaacaggaactatagggaatccacaactcag
atgaatgatcaggacgatgacaatggtgaaaatcctcacgatcttcttgctgcggccgga
ttagaggattccgatctggaggatgatgaggctgctgtgccctcatcagctgcaggaaga
cggaggcaggcatggtcggaatctgaggatgatgaaccatcacaaaggagatctgagtcg
agccccgtaagggaggatttggccgagcaacaagagagtgaaggagaaattagagaagat
aatcacaagcgaaatgcaggcgatgcgcttgacgatgaggattga
DBGET
integrated database retrieval system
