KEGG   Hibiscus syriacus (Rose-of-Sharon): 120150283
Entry
120150283         CDS       T09559                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120150283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120150283
   03041 Spliceosome [BR:hsyr03041]
    120150283
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120150283
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120150283
Spliceosome [BR:hsyr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    120150283
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 DUF7198
Other DBs
NCBI-GeneID: 120150283
NCBI-ProteinID: XP_039018907
LinkDB
Position
Unknown
AA seq 489 aa
MAKKRKQRSSETQPTETTPDPQSIQEQEQQQQPQYLPNEDPNPKLDEEQQLQEVEEELEL
EVEVEEEVEEDDDEEEDEEDEETPNQTLIGSSNAAIQNGPKKGTDQEKELDDEPFEKLLE
PFGKDQLITLIKKAVDKHPEFISSVREFADADPAHRKIFVHGLSWDTTAETLTAEFSKYG
EIEDCKAVTDRVSGKSKGYAFILFKHRSGARRALKQPQKKIGNRTTSCQLASQGPVPAPP
PTAPSASEYTQRKIFVSNVSADLDPGKLLYFFKQYGEIEEGPLGLDKQTGKPKGFAFFVY
RSVESAMKALEEPHKNFEGHVLHCQKAIDGPKLTKGGNGGTSGGHHQQFHQHQKGAHQIQ
SHYHHAKKGKYSSAGSQTGHLMAPSGPTAVGFSPGVAAHGFNPAAAVPALNPALGQALNA
LLSGQGGLGLGNLLGGFGGAPVNQGAPAPGYGNQVAGGYGVQGGYQNPQMGQGGAGRNHP
GGGAPYMGH
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcgaaaaagcgaaagcaacgatcatctgaaacccaacccaccgaaacgactccggat
cctcaatcaattcaagaacaagagcagcaacaacagccccaatatttacccaatgaagat
ccgaacccgaaattagacgaggagcagcaactacaggaagtcgaagaggaactagaattg
gaagtagaagtagaagaagaagttgaagaagacgatgatgaagaagaggatgaagaagac
gaagaaactccaaaccaaaccctaatcggttcctctaacgccgccattcaaaatgggccc
aagaagggaacggatcaagaaaaggaattggacgacgagccgttcgagaaacttctagag
ccattcgggaaagatcaattgattacccttatcaagaaagcggttgataaacacccagaa
tttatctcgtcagttcgggaattcgcggatgcagacccggcccacaggaagatcttcgtt
catgggttaagttgggataccactgctgaaaccctcaccgctgagttctctaaatatggg
gaaattgaagattgcaaagctgttaccgatagggtttctggaaaatcaaaaggttatgct
tttattctatttaagcatcggagcggggcacgccgggctttgaaacagccccagaagaag
attgggaatagaacgacttcttgccagttggcttcgcaagggccggttccggcaccacct
ccgactgctccgtctgcttccgagtatactcaaaggaagatttttgttagcaatgtgtca
gctgatttggacccagggaagttgctttatttttttaaacagtatggggaaattgaggaa
ggtccattggggcttgataagcagacagggaaaccaaaggggtttgccttttttgtatac
aggtcggttgagagtgccatgaaagcattagaggagcctcataagaattttgaaggtcat
gttttgcattgccaaaaagccattgatggaccgaaattgactaaaggtggtaatggaggc
acttctggtgggcatcatcagcagttccaccagcatcagaaaggagcacatcagattcag
tctcattaccatcatgctaagaagggaaagtattcatctgctggatctcagactggtcat
ttgatggctccgtctgggcctactgcagtggggttcagccctggagttgctgctcatggg
tttaaccctgctgctgctgtacctgctttaaacccagcgcttggacaggctttgaatgca
ttgctttctggccagggaggcttagggcttggtaatctccttggagggtttggtggtgcc
cctgtcaaccaaggggcacctgctccagggtatgggaatcaggttgctggaggctatgga
gtgcaaggtgggtatcaaaaccctcagatgggtcagggtggtgctggtaggaatcacccc
ggtggtggtgcaccctacatgggacattag

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