Hibiscus syriacus (Rose-of-Sharon): 120151075
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Entry
120151075 CDS
T09559
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120151075
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120151075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
120151075
NCBI-ProteinID:
XP_039019550
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MTTRLLLFLPLLFLFITPSVSAVLKLNVLSYGAKPDGSTDSTKAFLAAWTRACASTSPAS
IYVPKGRFLLRSVEFQGQCKNRAITIRIDGTLVAPTDYRVIGKADSWVAFKDVDGVSILG
GKFDAKGTGLWACKNSGKSCPDGATTLSFSKSKNIIVVGLKSLNSQMFHIVINGCQNVKL
QGVSVIASGNSPNTDGIHVQLSSSVTILNSRIQTGDDCISIGPGATNLWMEKITCGPGHG
ISIGSLGKDQNEAGVQNVTVKTATFIGTQNGVRIKSWARPSNGFARNIVFQHITMKNVEN
PIVIDQNYCPGNKNCPDQVSGVKVSDVTYQDIHGTSATEVAVNFDCSSKHPCSGIRMEGV
TLTYKNAVAAASCKHAGGTSLGVVQPTSCL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcgtctcctcctttttctcccacttctctttctcttcatcaccccatctgtt
tctgcagtgttaaagctcaacgtgctgagttatggtgccaaacccgacggctcaaccgac
tcaaccaaagcctttttagctgcatggactcgggcctgtgcctccactagccccgcgagc
atctacgtacccaaagggaggtttttgttgcgcagtgtggagtttcagggccaatgcaag
aacagggctatcacgattcggatcgacgggaccctcgtggctccgaccgattatcgggtc
atcggaaaggccgacagctgggttgcgtttaaggacgttgatggggtttccattcttggc
ggaaaatttgatgctaaggggactggcttgtgggcttgtaagaactccggcaagagttgc
cccgacggtgcaacgacactaagctttagcaaatcgaagaacatcattgtcgtcgggtta
aagtcgttaaacagccagatgtttcacatcgtaatcaacggctgccagaacgtgaaactg
caaggagtgtctgtcattgcctccggtaacagccccaacaccgatggtattcatgtacaa
ctatcgagcagcgtcaccatcctcaactccaggattcaaacaggcgatgactgcatctca
attggccctggtgcaactaatctctggatggagaaaatcacatgtggccccggccacggt
atcagcattgggagcttggggaaggaccagaatgaggctggtgttcagaatgtaacagtt
aaaacagccacattcataggtacccagaatggagtgaggatcaagtcttgggcaagacca
agcaatggatttgcaaggaacattgttttccaacatattactatgaagaacgtcgaaaat
cccatcgtgatcgaccagaactactgccccggcaacaaaaactgtcccgatcaggtttcg
ggagttaaagttagcgatgtgacataccaagacatacatggaacgtcagcgacagaggtt
gctgtaaactttgattgcagttctaagcatccgtgcagtgggatacgaatggaaggggtg
actcttacgtacaagaatgcagtagctgcagcttcatgtaagcacgccggtggaacttct
ctcggggttgttcagcctacaagttgtttgtag
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