Hibiscus syriacus (Rose-of-Sharon): 120151288
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Entry
120151288 CDS
T09559
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsyr04812
]
120151288
Cytoskeleton proteins [BR:
hsyr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120151288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Katanin_con80
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_EIPR1
WDR90_beta-prop_4th
PAC11
eIF2A
Beta-prop_WDR41
Beta-prop_RIG_2nd
TRM82_WD
CFAP251_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_ACSF4
Ribosomal_L28e
Motif
Other DBs
NCBI-GeneID:
120151288
NCBI-ProteinID:
XP_039019726
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MAKRGHKLQEFEAHNASVNCLSMGKRTFRLLITGGDDHKVNVWSIGKPTSLMSLCGHTSP
VESLAFDLAEVLVLAGASSGVIKLWDLEETKMVRGLTGHRSNCTALEFHPFGEFFASGSM
DTNLKIWDIRKKGCTHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLNEF
KFHEGHISSLDFHPLEFLLATGSADGTVKFWDLETFELIGSSRPEAAGVRLNTFHTDGKT
LFCGSDDGLKVYSWEPVVCHDSADIGWSTLGDLCINEGKLLGCSYYRNTIGVWGADIAHI
EPYGRNDRSEKKFNLEGSYSLEKAGSGMRSTLGSRPLSPDFETKEIKNIYVDTAGSSMIA
APKDGSLNSTKVVSPSDAGETSNLAAERQSPGIGVNAKSNGQSGNNPVVKETTNSGKESI
TFSRTKPGMLLRPAHVRRPSVNKFEVEKLSAAVESERLDRAVDLNSRTRLVSEDGYRTSC
GEKDSNIETVTEKSKEIQSPQTHSTQEARNESLDLNKNSNVKFVNGVAVVRGRTRSLVER
FERRDLLNSSDNPVTDGIPPAAPEADKIPSIMKGGTKISKTEPISANDTSPVESLISTTE
SASGSEGGITGSSIPRTETTTTSDQKGGTQISKSSANDITPIESLISTTESASGSEGGIT
GSSIPRRETTPTSDRIITGDRISRRESTFTSDRMNARNQSSRKESTFASNRIVTVNQISR
RQSNSASSGSITGNLISRRESTSASDGILTKNRITQSESTSISDGIVSRNQLTRNDMSRP
TGLVTENKISRVGMNSGNDGNVTIIENQISKGESISDNDGKLTESLMQMHDVFLSTLRSR
LTKLQVVRHFWEKNDIKGSISALRKLPDHSVQADVIGVLMEKMEIITLDLFSILLPVLIG
LLDSKMERHVNVSLEMLLKLVAVFGPMIRSTVSAPHGVGVDLHAEQRRECCNQCSTQLQK
IQKLLPPLARRGGTVGRGAQELNLVLQE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtggacataagctgcaggaatttgaggctcataatgccagtgtgaattgt
ttaagtatggggaaaaggacatttaggcttcttattactggtggagatgatcataaagtt
aatgtctggtcaattgggaaacccacttctttaatgagtctttgtggtcatactagtccg
gtcgagtctttagcttttgatctggctgaagtcttggtgcttgctggtgcatcttcgggt
gtgataaagctttgggatctcgaagaaacaaagatggttcgcggacttactggacacaga
tctaattgcactgctttggagttccatccatttggtgagttttttgcatctggttccatg
gatacaaatctaaagatatgggatattaggaaaaagggatgcactcacacatacaagggt
catactcgaggcattagcacgattagattcactcctgatggccgctgggttgtttctggt
ggatttgataatgttgtaaaggtgtgggatcttaccgctggaaaactcttgaacgagttt
aagtttcatgaaggacatatttcctccttagactttcaccctcttgagtttctccttgct
acagggtcggcggatggaaccgtaaaattctgggatttggaaacttttgaactgatcggg
tcttcaagaccggaggctgcgggggttcgcttgaatacctttcatactgatgggaaaact
cttttctgtggatcagacgatggtttgaaggtttattcatgggagccagtagtttgtcat
gattctgctgatatcgggtggtcaacactcggtgacctctgcatcaatgaaggcaaactt
ttgggttgctcgtactatagaaatactattggagtttggggagcagacatagcgcatatt
gagccatatggacgaaatgaccgttccgagaagaaatttaatcttgagggaagttattct
ttggaaaaagctgggagtggcatgagatcaactttgggatcacgacccctatcacctgat
ttcgagaccaaggaaataaagaacatatatgttgacactgctggcagtagtatgattgct
gctccgaaagatggctctttgaactctacaaaagtggtctccccatcggatgccggtgaa
acaagtaatctggcagctgagaggcagagtcctggaataggagttaatgctaaatctaat
ggacaatcgggtaacaaccctgttgtgaaagagactactaattctggaaaagaatcaatc
accttttcaaggacaaaacctggaatgttgctcagaccagctcatgttagaagaccatca
gtcaacaagtttgaggtcgaaaagctatcggctgcagttgaatcggaaaggttagacagg
gcagtggatctgaattctcggactaggcttgtatcggaggatggatatagaacatcatgt
ggtgaaaaggattcaaacatcgagactgtcacagagaaatccaaagagatacaatcaccg
cagacgcactctactcaagaagctcgtaatgaatccctcgatctcaacaaaaactcgaat
gtcaaatttgtgaatggagtggctgttgttagaggaagaacacgcagtctggtcgagagg
tttgaacgaagagatttattgaacagcagtgataatccagtgactgatggtatacctcct
gctgcaccggaagccgataaaataccatccataatgaaaggagggacaaaaatatctaaa
acggaacctatctcggccaatgatacaagtcctgtcgaaagtctaatttctacaacggaa
tcagcttctggctccgagggtggcattactggaagttcaattcctagaacggaaacaacc
actacttctgaccaaaaaggaggaacacaaatatctaaatcgtcggccaatgatataact
cctatcgaaagtctaatttctacaacggaatcagcttctggctccgagggtggcattact
ggaagttcaattcctagaagggaaacaacccctacttctgacaggataattactggagat
cgaatttctagaagggaatcaactttcacctcagataggatgaatgctcgaaatcaaagt
tctcgaaaggaatcaacctttgcatctaataggatcgttactgtaaatcaaatttctaga
aggcaatcaaattctgcatctagtggcagcattactggaaatctaatttctagaagggaa
tcaacctcggcttctgatgggatcttaaccaaaaaccgaatcactcaaagcgagtcaact
tccatttcggatgggatcgtttcaagaaatcaacttactagaaatgatatgagtagacca
actggtttagttactgaaaataaaatttctagggtgggaatgaattctggtaatgatggg
aatgttacaattatcgaaaaccaaatttcaaagggtgaatcaatctctgataatgatgga
aagctaaccgaaagtctgatgcaaatgcatgatgtattcttaagtacacttcggtcacgc
ttaacaaagttacaggtagtgcggcatttttgggaaaagaatgacattaaagggtccatc
agtgccctgcggaaattgcctgatcattctgtgcaagccgatgtgatcggtgttctcatg
gaaaaaatggagattatcaccttagatctcttttccatcctgcttcccgtgcttatcggc
ttattagatagcaaaatggaaaggcatgtaaatgtctctttggaaatgctcctgaagctc
gtagctgtttttggtccaatgatacgctcaactgtttcagccccgcatggtgtcggtgtt
gatcttcatgccgagcagaggcgagaatgctgcaatcagtgttctacgcagctacaaaag
attcaaaaacttcttccaccacttgcaaggagaggcggcacggtagggagaggcgcgcag
gaattgaatctagttcttcaagaatga
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