Hibiscus syriacus (Rose-of-Sharon): 120151303
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Entry
120151303 CDS
T09559
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
hsyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120151303
03460 Fanconi anemia pathway
120151303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120151303
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120151303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
DUF6429
Motif
Other DBs
NCBI-GeneID:
120151303
NCBI-ProteinID:
XP_039019746
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MEKNRRVMCPENEELANYLLQKRQELADKPKGIKENTDMTLSKAFNNICNAQHPIKTLKD
LSDIKGVGKWIMVLLRGYFDGGSGNSEPEDITRKGLGKKTKGNRRYLPQKNSVAYALLIT
LYRETVDGNEFLHKQDLIDATEASGLSRAPIAPEKGKGKPSQFGNSPRDWYSGWTCMSTL
IKKGFVVKSSCPAKYMLTPEGKEAARECLVKSKMEDPLENMVDAERLSQPDAQNASVQEL
CDSDLCSEETTEKADFQSKKSIDVPLDCLGRCTRMGYSKEQVLSAFAEVFQTVKNKEISS
LLPAVLCCLREDQVYGQEPRDGVRSIRIQLSKDGGDGLNLCTLRGCSSSRPSSNDLTADM
NVLSIPPLSFGERFEDVYEVILILDDREQFTSQGARSKKMLEKICAEFKIKTNVRRLPIG
DGIWIARHKYLSNEYVLDFIVERKNVNDLRSSIRDNRYRDQKLKLLRSGLKKLIYLVEGD
PNSSEAAESIKTACFTTEILEGFDVQRTSGLHDTLRKYAHLTRAITQYYKQNLPEDDSRL
TGVCPSFSEFIRRCQELDKVTVSDVFSIQLMQVSQVTEEVAIAVVDLYPTLVSLAHAYSL
LEGDVCAQEDMLRKQSNNVVSSVASKNIFRFVWG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaatagacgagtaatgtgtcctgagaatgaggaactagctaattacttgttg
caaaagaggcaagaactggccgataaacccaaggggataaaagaaaacactgacatgact
ctttcaaaggcattcaacaacatttgcaacgctcagcatcccatcaagacactcaaagat
ctcagtgacatcaaaggtgttgggaaatggattatggtgcttttgcgtggctattttgac
ggtggttcaggaaattcagaaccagaagacataactagaaagggtttaggtaaaaaaact
aaaggaaacagacgttatttgccccaaaagaattcagtggcgtatgcattattaattact
ctatacagggagaccgtggatgggaatgaatttttgcataagcaggatcttattgatgca
actgaagcaagtggactctcacgggcgcctattgcgccagagaaaggaaaagggaaacct
agccaatttggaaattctccaagggactggtatagtggatggacctgcatgtctacgctg
ataaaaaagggatttgttgtgaaatcaagttgtccggcgaaatacatgctgacaccagaa
ggcaaggaagcagcacgtgaatgcctcgtgaaatctaaaatggaagatcccttagaaaat
atggttgatgcggaaaggctttctcaaccagatgcgcaaaatgcatctgttcaggagtta
tgcgattctgatttgtgttcagaagagacaactgaaaaagctgattttcagtcgaaaaaa
tccattgatgttcctcttgattgtcttggaaggtgtactcgcatggggtactcgaaggaa
caagttctttctgcttttgctgaagtctttcaaactgtgaagaacaaggagatttcttca
cttttgccagctgtcttgtgttgtcttcgagaagatcaagtttatgggcaagaacctcgt
gatggagtgcgaagtattaggattcaattaagtaaagatggtggagatgggctgaactta
tgtaccttgaggggctgttcttcctctaggccaagttccaatgatctaacagcagatatg
aatgtcttaagtattccgcctctgagctttggggagaggtttgaggatgtatatgaagta
atcttaatattagatgatcgagagcaatttaccagtcaaggtgcacggtccaagaaaatg
ttggagaagatttgtgcagaattcaaaatcaaaacaaatgttagaaggttgcctatagga
gatggaatctggatagctcgccataaatatctctccaatgaatatgttctagactttatt
gttgagaggaagaatgttaacgatctacgctcttcgatacgggataatcgttacagggat
cagaaactaaagcttctgagatctggacttaagaagttgatatatcttgtggaaggtgac
ccgaattcttcagaagctgctgaaagcatcaaaactgcgtgcttcacaacagagattctt
gaggggtttgatgttcagagaacaagcggtttacatgataccctgaggaagtatgctcat
cttactcgggcaataactcaatattacaaacagaacctgccagaggatgattccagattg
accggggtctgtccctcctttagtgaatttatccgaaggtgccaagagctggataaagtg
acagtcagtgacgtattttccattcaacttatgcaggtgtcacaggtgaccgaggaggtt
gccatagctgttgtcgatttgtatccaacattagtgtctcttgcacatgcttactctctt
cttgagggtgatgtctgtgcacaagaagatatgcttaggaagcagagtaacaacgtggtg
agctcagttgctagtaagaatatttttcgatttgtttggggttga
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