Hibiscus syriacus (Rose-of-Sharon): 120151484
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Entry
120151484 CDS
T09559
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120151484
04121 Ubiquitin system [BR:
hsyr04121
]
120151484
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
90S particles
Other 90S particles
120151484
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120151484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_HPS5
WD40_RFWD3
PROPPIN
eIF2A
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
VID27
LuxS
WDR54
Motif
Other DBs
NCBI-GeneID:
120151484
NCBI-ProteinID:
XP_039019845
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRSQERAVEYVRALNAAKLDKIFARPFIG
AMDGHRDSIKCMAKNPNYLKAIFSGSDDGDIRLWDIASRRTVCQFPGHQGAVQGLTVSTD
GSILVSCGSDSTVRLWNISDANHADSDNLSDNSAKPQAVYVWKNAFRAVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNTFDWGADTTISIRFNPGEPNILATSANDRSITLYDLRMSSPAR
KVIMRTKTNSIAWNPMEPMNFTAANEDCNCYSYDARKLEEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKYSCDASYVISGSDDTNLRVWK
AKASEQLGVVLPRERKKHEYLEAVKNRYKHLPEVKRIVRHRHLPRPVYKAANLRRTMIEA
ERRKEQRRKAHSAPGSIVTEPVRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtcatatcacgctccacagatgagttcactcgagaacgaagccaagac
ctgcagagggtgtttcgtaatttcgaccccagcctacgatcccaagagagagcagtcgag
tacgtccgcgctcttaatgccgccaaattggacaagattttcgcaagaccgtttattgga
gcaatggatgggcatagagattccatcaagtgtatggcaaagaacccaaattatttgaaa
gcaattttttccggttctgacgatggagatatccgactgtgggacatagcctccaggcga
acagtttgtcagtttcctggtcaccaaggtgctgtacaaggtttgacagtatcgacagat
ggaagcattcttgtatcatgtggaagtgactccactgttaggctctggaatatttctgat
gctaatcacgctgattcagataatctttctgataattcagccaagccacaagcagtttat
gtttggaagaatgcattccgggctgttgaccatcagtgggatggtgatctctttgccaca
gctggtgctcaagtagatatatggaaccacaacaggtctcagccagtgaacacgtttgat
tggggagcagacaccacaatatctattcgatttaatccaggagagccaaatatcttggca
acatcagctaatgaccggagcataacattgtatgatctgcggatgtcatccccagcaagg
aaagttattatgaggacgaaaaccaattctattgcttggaacccaatggagcctatgaac
ttcactgcggcaaatgaggattgcaattgctacagctatgatgctagaaaactggaggag
gccaagtgtgtgcacaaagaccatgtttcagcagtaatggatattgatttctcaccaact
ggtcgggaatttgtaacgggatcttatgatagaactgtcagaattttccagtataatggt
ggccacagtcgagaaatctaccatacaaagagaatgcaaagggtgttctgtgtgaagtat
agctgtgatgccagttatgtcatttcgggaagtgatgataccaaccttagggtctggaaa
gctaaagcatcagaacaattgggagtagtacttccaagggaaagaaagaaacacgagtat
cttgaagccgttaagaatcgctacaagcacctgcctgaagtcaagcgtattgtaaggcac
aggcacttgccaagaccagtttacaaggcggccaacctcagacgcactatgattgaagca
gaaaggaggaaagaacaaagaaggaaagctcacagtgcccccggaagcatagtgactgaa
ccggttcgtaaaaggagaatcataaaagaggttgagtga
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