Hibiscus syriacus (Rose-of-Sharon): 120151715
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Entry
120151715 CDS
T09559
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120151715
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
120151715
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120151715
Prokaryotic type
120151715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
GAS2
DUF3858
Motif
Other DBs
NCBI-GeneID:
120151715
NCBI-ProteinID:
XP_039020026
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MDTSDTLVTKITSLQPPQQEPDSKRLKMSTTTTSDDDEAVATITDAKKQRYKRRKIAMFF
AYCGVGYQGMQKNLGAKTIEGDLEEALFLSGAVPEQDRGNPKRYDWARSARTDKGVSAVG
QVISGRFYIDPPGLVERLNQILPTQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDP
SCHRDRESIMASVGSGNELVKCLECSEIGRKVIGVMGKRSFETKSTVVQSGISSNSEDAE
NATKEDNLISDLKEEVTEMDNSGVVEVKVNVVKSTTVQSGISSNIADAENAIMGNKLTSE
LKEEVTEMDDYGVVADKVIEAKSTIVQPDISSNVGDVENTIKEDNPTSELKEEVTEMDNS
GFVEDKVDVEKKEETKFCYGEEEKERFNRILIHYIGSHNFHNFTTRTKAEDPAARRYIVS
FHANKVVTVEGIDFVKCEVVGQSFMLHQIRNMIGMAVAVMRNCAPESLIETALRKDVHIN
VPTAPEVGLYLDECLFSSYNQKWKDTHEELSMKAYEEEAEEFKMKFIYSHIASKEREEGT
VGLWLHSLNHRNYPDLRACSGDTINGKKSPKVDDGADTIEEKSNAGENSGDTAEIHTVQE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcagataccctcgtcaccaaaatcacttctttgcagccgccgcagcaggaa
cctgactctaaaaggctcaaaatgtctaccaccaccacgtctgacgacgacgaagccgtc
gccacgataaccgacgccaaaaaacagagatacaaacgccgcaaaatcgccatgttcttt
gcctactgcggtgtcgggtatcaaggaatgcaaaaaaacctaggagccaaaaccatcgaa
ggtgacctcgaggaagcgttgttcctatccggcgctgtccccgagcaagatcgtggtaac
ccaaaacgttacgactgggctcgatcggcacgtaccgataagggcgttagcgcagttggc
caggtcatttctgggcggttctacattgacccgcctggcctcgttgagcgccttaatcaa
atacttccgacccagattcggatattcgggtataagcgtgcgacggcctcttttaatgca
aagaagttttgtgatcgacggcggtatgtttatcttatccctgtttttgctcttgatcct
agttgtcatcgagatagggaaagtattatggctagtgtaggatccggtaatgagcttgtt
aagtgcttggaatgttctgaaataggtcgtaaagtcataggtgttatgggcaagcgtagt
tttgagactaagtctactgtagttcagtccggcatttcatcgaacagtgaagatgctgaa
aatgcaaccaaggaagataacctgatatccgatcttaaagaggaggttactgaaatggat
aactcgggggttgtggaagtcaaagttaatgtagtcaagtcgacaacagttcaatctggc
atttcatcgaacattgcggatgcagaaaatgcaattatgggaaataaacttacttctgag
cttaaggaggaggttactgaaatggatgattatggggttgtggcagataaagttattgag
gccaagtcgactattgttcagcctgacatttcgtcgaacgttggagatgttgaaaataca
attaaggaagataacccgacttctgaactgaaggaggaagttaccgaaatggacaattct
ggatttgtggaagataaagttgatgtagaaaagaaagaggaaacaaagttttgttacggt
gaggaagagaaggagaggttcaatagaatactgattcactatattgggtctcacaacttc
cacaacttcactacaagaacgaaagctgaagatcctgctgcacgtcgatatattgtttca
tttcacgcgaacaaagttgttaccgtcgagggcattgattttgtcaagtgtgaggttgtg
ggtcagagcttcatgcttcatcagattcgaaatatgatcggcatggctgttgctgtcatg
aggaattgcgcccctgagtctctgattgaaactgcattgcgaaaggatgtacacatcaac
gtaccgacggcacccgaggttggtttgtacttggatgagtgcctcttttcgtcttataac
caaaaatggaaagatactcatgaagagttgtctatgaaagcatatgaagaagaggcagag
gagttcaaaatgaagtttatatactcgcatattgcctccaaggagcgtgaggaaggaacc
gttggcctgtggttgcattctctaaaccacagaaactatcccgatttacgggcctgcagc
ggagacacaatcaatgggaagaagagtccaaaggttgatgatggtgcagacaccattgaa
gagaagagtaatgcgggggagaatagcggagacactgctgagatacatactgtgcaagag
tag
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