Hibiscus syriacus (Rose-of-Sharon): 120151748
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Entry
120151748 CDS
T09559
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120151748
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120151748
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120151748
NCBI-ProteinID:
XP_039020046
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MLPFAYILWICILGSIPSFSRAAFNLSLPHQHLDPESVALDVQRSLNASLSRRRALSVHE
KGQCRTGNPIDDCWRCDPDWYNNRQRLADCSIGFARGTLGGKGGRIYTVTDSSDHDTVNP
KPGTLRHAVIQDEPLWIVFSTNMVIKLKHELIFNSYKTVDGRGANVHITGNGCLTLQYVS
HVIIHNIHVHHCRPSGNTDIAASPTHVGRRGRSDGDGISIFGSQKIWVDHCSLSYCTDGL
VDAVMGSTGITISNSYFSHHDEVMLLGHDDRYLPDSGMQVTIAFNVFGEALVQRMPRCRR
GYIHVVNNDFTSWKMYAIGGSGNPTINSQGNRYTAPGDASAKEVTKRVDTDEDWTDWNWR
TDGDIMVNGAYFVPSGAGIMTQYVKASSVEPKSAVLVEQLTSNAGVYGESREETGSFSSP
GYSGTTNTGSGGSDNDSNFFGMIFRSGAPPPPPSPSMDSMFLSSLIILLLHSITNQGALP
LLLLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctccctttcgcctacattctctggatatgcatcttgggttcaattccctcattttca
agagctgccttcaatctcagcctccctcatcagcaccttgaccctgaatctgttgctctt
gatgttcaacggagcttaaatgcatccttatctagaagacgagccttgtccgtacacgaa
aaaggccaatgccggaccggaaaccccatcgacgattgctggagatgcgacccagattgg
tacaacaaccgccaacgcttagccgactgctcaatcggcttcgcccgaggcacgctcggc
ggtaaaggcggccggatctacaccgtcaccgactcgtccgaccacgacaccgtcaacccc
aaaccgggcacgctccgacacgccgtcatccaagacgagccgctgtggatcgttttctcg
acaaacatggtcatcaagctcaagcacgagctcatcttcaactcttacaagaccgtcgac
ggtcggggggccaacgttcatatcaccgggaacgggtgtttgacgttgcagtatgtctcg
catgtcatcatacataacatccatgtccaccattgtaggccgtcggggaacaccgacatc
gctgcgtcgccgacgcatgtggggcggagagggagatcggacggcgatgggatatcgata
ttcgggtctcagaaaatctgggtggatcattgctcgttgagttactgtactgatgggttg
gttgatgctgttatgggttccactgggattaccatcagcaacagctatttttctcatcat
gatgaagttatgctcttgggacatgacgacaggtatttgccggattccgggatgcaggtg
acgatagctttcaacgtgttcggggaagctctggtgcaaagaatgccgaggtgtaggagg
gggtacatacacgtggtcaacaatgatttcacatcatggaaaatgtatgctatcggcggt
agcggtaaccccaccatcaacagccaagggaaccgttacactgcgccgggggacgcaagt
gctaaagaggtgaccaagcgagtggatacagacgaggactggacggactggaactggaga
acagatggggacataatggtaaatggcgcgtactttgtgccctccggtgctggcataatg
acccagtacgtcaaagcttccagtgtggaacctaaatcggccgtcctcgttgagcagctc
acttcaaacgctggcgtttatggtgaatccagggaagagaccgggagcttttcttctccg
gggtactccggcacaaccaacaccggcagtggcgggtccgacaatgacagcaacttcttc
ggaatgatattcaggagtggagcaccaccgcccccaccgtccccatcgatggattcaatg
tttttgtcctctctaattattctgttgttgcattcaatcaccaaccaaggtgctctacca
ttattattgttattgtag
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