Hibiscus syriacus (Rose-of-Sharon): 120151773
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Entry
120151773 CDS
T09559
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120151773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120151773
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120151773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
TCTP
Motif
Other DBs
NCBI-GeneID:
120151773
NCBI-ProteinID:
XP_039020064
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MRKRHLYHPEHSFHEYPFEVFIRDSWHAVELIRIKKGYMTLHIIDDQYLIEKKPFADFRV
RSRQATLPDCTCFLRSGIDICVLSFPEQTETQDEDTPEPVLVDAKISSIERKPHDSECSC
QFYINFYVNRAPLGSEKGTVNTETKVVGIDQIRILQKLEKHPCDDQHYRWNVSEDCSTLK
KTKLFLGKFSSDMSWLLVTSVSKQIAFDVKSVQNKIVYQILAEDDESPSRYNNYLQAVNI
TSENGISVSNVIRFDPLENNEVDAAFRADETKQWPVYDAMNLRRSKRRFVQPERFIGHDG
PPGTETTFYLTAAHRISIRREEQDEQEADMDMPISHLLCMNASPSEELTLPETRDVTSNN
NNTPKEVKSDVTTSKKSSGRSRGRPRGTNRSKHQNDLAIVPVSSKTDALASENLHVLRSP
TNLSEEIEQLSTYYYKMKCCRANKQKKISALDYMDGGNAWKGRPQPSKVQSKSYRSSQTR
MNDFDDPKTYKKTTLSAGAYNKLINSYMKNIDSTSIKDESHIIDRWNQFKEAKTAEMNRK
TEPEQPQVEEEEEMSENEMLWREMELCMASTYFDDDEARVSAESLRKASESCRHEFKLDD
EVGVLCRICGFVSTEIKHVSAPFLERKSWIAADGKTCYEDEPEHKADEEEGLNLFCNYSS
IGTPLSDESDNVWALIPELRKKLHFHQKRAFEFLWLNIAGSLIPQLMEQSSKKTGGCVVS
HTPGSGKTFLIIAFLASYLKLFPGKRPLVLAPKTTLYIWYKEFIKWEIPVPVHLIHGRKS
YRVFKNSMKFHGVPRPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDAKFEHR
KFMAKVLRESPGLLVLDEGHNPRSTKSRLRKVLMKVETDLRILLSGTLFQNNFCEYFNTL
CLARPKFVHEVLRQLDPKYKKKKRFDKARHLLENRARKFFLDKIARKIDAGVGDERLQGL
NMLRNITNRFIDVYEGGNFDCLPGLQIYTLMMNSTDIQHEILVKLHKIMSTYTGYPLELE
LLITLASIHPSLVRTSNCSAKFFSPEELMQLEMMKIDFRKGSKVMFVLNLVYRIIKNEKV
LIFCHNIAPINLLADMFERIFRWRRGREILVLTGDLELFERGRVMDKFEEPGGASRVLIA
SITACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLATGTLEEDK
YRRTTWKEWVSSMIFSEAFVEDPSQWQAEKIEDDVLREIVAEDKVKSFHMIMKNEKASTG
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaggcatttatatcacccggagcattcgttccacgaatatccattcgaggtc
ttcatccgagactcgtggcatgctgtggaactcatacgaattaagaagggatacatgact
ctacatattatagatgatcaatatttgatcgagaagaaaccgttcgccgattttcgtgtt
aggtctcgtcaggcaactttgccagattgcacttgcttcttgaggtctggtattgatata
tgcgtcctttcgttcccagagcagacagagactcaagatgaagacactccggagcctgtg
ttggttgatgctaaaataagttccatcgagaggaagcctcacgattccgaatgctcgtgc
cagttctacataaacttctatgttaaccgtgctcctctcggttcggagaaaggaactgtt
aacacagagactaaagtggtaggaattgatcagattcgtatcctacaaaagctcgaaaag
catccatgtgatgatcagcactatagatggaatgtctcagaggactgctcgacactgaag
aaaactaagctatttttggggaaattctcatccgacatgtcgtggctgctcgttacgtct
gtttcgaagcagatcgcattcgatgtcaagtccgtgcagaacaagattgtgtatcaaatt
ctagctgaagatgatgagagtccctcaagatataataactatctccaggcggtaaatatc
acatcagagaatggtatttccgtttccaatgtgatcaggttcgatcccctcgaaaataat
gaagtcgatgcagcttttagagccgatgagaccaagcaatggccggtttatgatgctatg
aacttgcgacgctctaaacgcaggttcgtgcaaccggagcgtttcattggtcatgatggc
cctccagggacagagactacattttatctaacagctgcgcatagaataagcatccgcaga
gaagagcaagacgagcaagaagcggatatggatatgccgatatcgcacttgttatgcatg
aatgcgagtccttcggaggaacttaccctacctgaaacacgagatgtcacgtcaaacaat
aataatacaccgaaggaggtaaaatcagatgtgactacttctaagaaatcgagtggcaga
agtcgggggagacctcgggggactaatcggagtaaacatcagaatgatcttgctatcgtt
cctgtgtcttccaaaaccgatgctctagcctccgaaaacttgcatgtcctgagaagtccg
acaaatttatcggaagagatcgaacaactctctacgtattattataaaatgaagtgctgc
cgtgcgaacaagcagaagaagatttctgctttagactatatggatggtggaaatgcttgg
aagggaagacctcaaccatcgaaagtacagagtaaaagttatcgatcttctcaaacacga
atgaacgatttcgatgatccgaaaacttacaaaaagacaactctaagtgccggtgcgtac
aataaactaataaattcatatatgaagaatattgattctacatcaataaaagacgagtcg
cacattatcgaccggtggaatcagtttaaggaagcaaaaaccgcggaaatgaatagaaaa
acagaaccagaacaaccacaggttgaggaggaggaagaaatgtcggaaaacgaaatgttg
tggagagaaatggaactatgtatggcatcgacttacttcgacgatgacgaggcaagagta
tctgccgagtctcttcggaaagctagtgaaagttgccggcatgaattcaagctggacgat
gaagtcggggttctatgtcgtatctgtggctttgttagcactgaaataaagcatgtttct
gcaccatttctggaacgtaaaagctggatagcagcagacggtaaaacgtgctacgaagat
gagccggagcataaagcagatgaagaagagggcttgaatcttttctgcaattactcttct
ataggaacaccattatcggacgaaagcgataatgtatgggcgctgatccccgaacttaga
aagaagttacacttccaccagaaaagggcctttgaattcctatggctaaatatagcaggt
tctttgatacctcaacttatggaacagtcctcaaagaaaaccggcggttgtgtagtttct
catacaccgggatccggtaagacgtttctcattatcgcattccttgctagctacttgaag
ctattcccgggaaagaggcctttggtacttgctccgaagacaactctatacatttggtac
aaggaattcatcaagtgggaaatcccggtaccggttcatttaattcacggccgtaaaagt
tatcgagtcttcaagaactcgatgaagtttcacggagtaccgagacctagtcaagatgtt
atgcatgttttggattgtctcgacaagatacagaagtggcatgctcaaccgagtgttctt
gtgatgggctacacttcgttcttgacgttaatgcgagaagatgcaaagttcgagcaccga
aaattcatggctaaggtgctgcgtgaaagtccggggctcctggtattggatgaggggcac
aacccgagaagtactaaatcgaggttgagaaaggttttgatgaaagtcgagacagatctg
aggatattgctctcgggtacattatttcagaacaacttctgtgaatatttcaacaccctg
tgtctcgcaaggccgaaattcgtgcacgaagttttgaggcaattagatccgaaatacaag
aaaaagaagcggttcgacaaagctcgccatttgttagaaaaccgagcaagaaaattcttc
ctagacaaaatcgctaggaagattgatgctggcgtcggagacgagaggctgcaaggtctt
aacatgttgaggaacatcacaaacagattcatcgacgtatatgaaggcgggaatttcgac
tgcctcccaggtctacaaatttacaccctaatgatgaactcaacggacatacaacatgag
attttggtaaaactccacaaaataatgtctacatatactggctatccattggaattggaa
cttctgataacactcgcatcgatacatcctagtttggtccggacttcgaactgtagtgct
aaatttttcagtccagaagagttgatgcagcttgagatgatgaagatagattttagaaaa
ggttccaaggtaatgtttgttttgaaccttgtttatcgaatcatcaagaacgaaaaggtt
ctcatcttctgccacaatatcgcccccattaatttgcttgcggatatgttcgagagaatc
ttccgatggcggaggggtagagaaatattagtccttacaggggacttggagctattcgag
agaggacgagtaatggacaagttcgaggaaccaggtggtgcttcgagggtacttatcgct
tcgattacagcatgtgccgaaggcattagtttgacagccgcgtcgcgggtgatcttattg
gattcggaatggaacccttccaagacaaagcaggcaattgcgcgtgcttttcggcctggt
cagcaaaaggttgtgtatgtgtatcagctgttggcaacaggcacactcgaggaggacaag
taccgtcggaccacatggaaagaatgggtatcgagtatgatttttagcgaagcgttcgtc
gaagatccgtctcaatggcaagcagaaaagatcgaagacgacgtattgagggagatagta
gcagaggacaaagtgaaatcattccatatgatcatgaaaaacgaaaaggcctcgacaggt
tga
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integrated database retrieval system
