Hibiscus syriacus (Rose-of-Sharon): 120153501
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Entry
120153501 CDS
T09559
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120153501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120153501
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120153501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
DUF1400
Motif
Other DBs
NCBI-GeneID:
120153501
NCBI-ProteinID:
XP_039021372
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MAMEMEERGKVGTLMEKATNSTASEVDPRLLKAIKSVVRSSDFELRLAAHTLMDLMKRDH
SQVRYLTLLIIDELFMRSKLFRTLLVENLDQLLALSVGFRRNMPLPAPPAIASALRSKAI
EFLEKWNASFGIHYRQLRLGFDYLKNTLRFQFPNLQETAARIERERRERERRTREILQNK
FEILKTNFSSVKEEIQSTVDEIGQCLDIVRTKEECVPPILLDDEDFVEFRSAELRQIRLD
SLKEGEKIHENNDNKVVFDALRELYKLLVTKHLVLVQERISLLIRVEVADNRSRESMLKE
LIDIRNSLMSVKKDCEESGCALPKTAKNNTEEEEDFWEEGDFGSIKNGITTEPEKHKEVE
SCNADEKSRSVEDRNSKKSNKRSKNLAKLPASSMVKGKDKDCSNLSSKGKETQGHEKSVR
GDLLAEAPVLKWGSFLDNWGSVSNRDTLANQKGLELDNHWGRVDYDAVIPAEKIAELNLQ
ATIYQEKVGEIQPCRAPLNKGGLCQRRDLKVCPFHGPIIPRDDAGNPINQNSSTDNTDPD
LGSDLAEQLAKQAVNNVRERDKEEARKRKLAKQSLQREKLAKVREHNEAVLRDAAMASTS
ISAAFGEDMGETVGERSAGRRNKQTLASMLRKKVTTKDRLAQRLLNTRATDAMIRQMTQG
DDATYKESFPNQW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggctatggagatggaggagcgaggaaaagtcgggactttgatggaaaaagccacgaac
tcgacagcttccgaggttgatccacgccttctcaaagcaatcaaatcggtggtccggtcc
tccgatttcgaacttcgactggccgcccataccctcatggacctcatgaagcgcgatcat
tcccaggttcgttatctcacgcttcttataatcgatgagcttttcatgcgatctaagctt
ttcagaacccttctggttgagaatttagatcagttgttggccttaagtgttgggttcaga
agaaatatgccgctcccagctcctccagcaattgcgtcggctttgcgttctaaggcaatt
gagttcttggagaagtggaatgcatcttttgggattcattacaggcaacttagattaggt
tttgattatcttaagaatactctcaggtttcaatttcctaaccttcaggagactgcggcc
agaatagaacgagagagaagggaaagggagagaaggactcgggaaattttacagaacaag
tttgaaatcctgaagacaaattttagttctgttaaggaagaaatacagtctacagttgat
gagattggacaatgtttagatattgttcgtactaaagaggaatgtgtgcctcccatccta
ttggatgatgaagattttgtagagttccgttctgctgaattgaggcagatacgccttgac
tcattgaaggaaggagaaaaaatacatgagaacaatgataacaaagtggttttcgatgca
ttaagagagctgtataagcttttagtgactaagcatctggttttagtacaagaaaggatt
tctcttctcataagggtcgaagtggctgacaacaggtcacgagaatccatgctgaaggag
ttgattgatatacggaacagtctcatgtctgtgaagaaggattgtgaagaatctggttgt
gctttacccaaaactgcaaaaaataacacagaggaggaggaagatttctgggaggaaggt
gattttggatcaatcaagaatggaattactactgaacctgagaagcataaggaggtagaa
agttgtaatgcagatgagaaaagtagatctgttgaggataggaattccaagaaatcaaat
aaacgtagcaaaaatcttgctaaattgccagcttctagcatggtgaaaggcaaagataaa
gactgcagtaacttgagttctaagggcaaagagactcaaggccatgaaaaatctgttagg
ggtgatcttttggctgaagctccagttctcaagtggggttctttcttggataattggggc
tcagtctctaatagggatacattagcaaatcagaaaggcttggagcttgacaatcactgg
ggaagagtagattatgatgctgtgattccagctgagaaaattgcagaattgaatcttcag
gcgactatttaccaggaaaaggtaggggaaatccaaccatgccgtgcacctttgaataaa
ggtggactttgtcagagaagagatttgaaggtttgcccatttcatgggcccattatacct
cgagatgatgcaggaaacccaatcaatcagaattcttcaacagacaatacagatcctgat
ttaggctctgatttagcagagcagttagcaaaacaagctgtgaacaatgttagggagcga
gataaagaggaagcaaggaagagaaagcttgcaaaacagtcattacagcgggaaaagctt
gctaaagttcgggaacacaatgaagctgttcttcgtgatgctgcaatggcttcaacatca
atatcagcagcttttggagaagacatgggggaaactgttggagagaggtcagcggggaga
agaaacaaacaaactctggcatccatgctgcggaagaaagttacgacaaaagataggtta
gctcagagacttctaaacacccgggcaacagatgcaatgataagacagatgacccagggc
gacgatgcaacttataaagaatcctttcccaatcaatggtag
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