Hibiscus syriacus (Rose-of-Sharon): 120153838
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Entry
120153838 CDS
T09559
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120153838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120153838
03041 Spliceosome [BR:
hsyr03041
]
120153838
03032 DNA replication proteins [BR:
hsyr03032
]
120153838
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
120153838
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
Sm proteins
120153838
U2 snRNP components
120153838
Complex B
U1 snRNP components
120153838
U4/U6.U5 tri-snRNP components
120153838
Complex C
U2 snRNP components
120153838
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
120153838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6897
Motif
Other DBs
NCBI-GeneID:
120153838
NCBI-ProteinID:
XP_039021643
LinkDB
All DBs
Position
Unknown
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHESSGHIVTVELKSGELYRGSMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKSSSLGVGRGRAVAMRAKAQAAGRGT
TSGRGAVPSIRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagtttgggcataccggtgaagctactacacgagtcgtcgggtcacatcgta
acggtggagctaaaaagtggagagctttacagaggaagcatggtcgagtgcgaggataac
tggaattgccagctcgagaacatcaccttcactgctaaagatggaaaggtttcacagctt
gagcatgttttcattcgaggcagtaaagtcaggttcatggttataccggatatgttgaag
aatgctcctatgttcaaacgcttggatgctaagatcaagggtaagagctcttctcttgga
gttggcagaggtagagctgttgcaatgcgagccaaagcgcaagctgctggccgtggcaca
acatccggcagaggtgctgtgccatctattcgtagataa
DBGET
integrated database retrieval system
