Hibiscus syriacus (Rose-of-Sharon): 120154370
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Entry
120154370 CDS
T09559
Name
(RefSeq) protein transport protein Sec24-like At4g32640 isoform X1
KO
K14007
protein transport protein SEC24
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120154370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120154370
Membrane trafficking [BR:
hsyr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120154370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
120154370
NCBI-ProteinID:
XP_039022076
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MAAPVPPGAPRSGANARQQPPPPNFNPNNQTDPNSLADNLQNLNLNRPFTMPNSGPRPPP
FGQQAPFHQSSVSAGFPVASRPGLPPGMVGRPAVVPPGPPQSTLPVNVPPGRPVGSPVSH
LPPFGARPPSASLPSSTGGAVLPSGAFPSSGVSSVSVAPSPAGSRPGSFVSSSPFIGGPA
VPMSNALAGPLSNGPPAVGSGGLPGPPRFPSAASVSQPPVGPPTSTMSARPPAQASTMHS
VLGSSAVSYSLTPPLPSASPFSAVPQARPPPPGSPYGPQTWPMQPQQGSQPPHIPGATHA
QPPRMFGMPQLPNQAGTTIPPAISQPGAPLSGSSKIDPNQIPRPVPSATPIVYETRHGNL
ANPPPPATSDYIVRDTGNCSPRYVRCTLNQIPCTADLLTTSGMQLALLVQPMALSHPSDD
PIQVVDFGESGPVRCSRCKGYINPFMKFIDQGRKFICNLCGFTDDTPRDYHCNLGPDGRR
RDADERPELCKGTVEFVASKEYMIRDPMPTVYFFLIDVSMNAVQTGAIAAACSAISQVIA
DLPEGPRTLVGIATFDSTIHFYNLKRALQQPLMLIVPDIQDVYTPLETDVIVQLSECRQH
LELLLENIPTMFQTSTTAESCFGAAIKAAFLAMKSTGGKLLVFQSVLPSVGIGALSSREA
EGRTNISASEKEAHKLLQPADKILKTLAIEFAEYQVCVDVFLTTQSYVDVASISVIPRTT
GGQVYYYYPFSAVSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVHDYSGNFCRRIPT
DIDLPGIDSDKCILVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTNLSLPCTNMLS
NLFRAADLDAQFANFLKQAAIEIPTAPLMQVRDQVTNLCINTLLSYRKFCATVSSSGQLI
LPEALKLLPLYTLALIKSTGLRNDGRIDDRSFWSNYVSSLSTPLAVPLVYPRMFAIHNLN
SKEGDDSILPPTIPLSSEHVSDDGIYLLENGEDVLINFGSSVDSNIMQQLFGFNSVDEVP
TQFVMRQFDNPLSKKLNDVVNVIRQQRCSYLRFKLCKKGDPLGMLFLSCMVEDKNVGGPS
YVEFLVHIHRQIQMKMS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccagtgcctccaggggcacctagatccggcgccaatgcacggcagcaacca
ccaccgcctaattttaatcctaataatcaaaccgatcccaattccttagccgataacttg
cagaatttgaacctaaatcggccctttactatgcccaattctggtcctagacctccacct
tttggtcaacaagcacccttccatcaatcttcagtctctgctggatttccagttgcctca
cgtcccggactaccacctggtatggtgggaagacctgccgtggttcctcctggaccacca
caatccacgttacccgtgaatgtacccccaggaagaccggttggttcacctgttagtcac
ctgcccccttttggggctagacctccttctgcttcattgccttcatctacaggtggtgcg
gttctaccttctggtgccttcccatcttcaggtgtatctagtgtctctgttgcaccatca
ccagcaggttctcgcccgggttcttttgtgtcatcttcaccttttattggtggtcctgct
gtgccaatgtcaaatgcacttgctggtcctttgagtaatgggccacctgcagttggctca
ggaggtttgcctggtccaccccgattcccttctgctgcaagtgtttcacaaccccctgtt
gggcctccaacatctacgatgtcagctaggccacctgctcaggcttcaaccatgcattct
gttttgggaagttcagctgttagttattcgttaactcctcccctgccttcagcatcacca
ttttcagctgtgcctcaggctagaccaccacctcctggttctccttatggaccacagaca
tggccgatgcaaccccagcagggatcccaacctcctcatattcctggtgctacacatgca
caacctccaagaatgtttggaatgccacaacttccaaatcaagctgggactaccattcca
cctgccatcagtcaacctggagcacctctgtcagggtcgtcaaagattgatcctaatcaa
attccaaggcctgttccaagtgccacacctatcgtgtatgaaactcgccatggcaacttg
gcaaatcctcctccgcctgctacaagcgattacatagttagagacactggaaattgtagt
ccacgatatgtgagatgtaccctcaatcagatcccttgcacggccgaccttttgacaacc
tctggaatgcagctagctttgttagttcaacctatggccctctctcatccatcagatgat
cctattcaagttgtggatttcggggaaagtggtcctgttcgatgttctcgttgcaaaggt
tacataaatcctttcatgaagtttattgatcaggggaggaagtttatctgcaatttatgc
gggtttactgatgatactcctcgtgactaccactgcaaccttggtcctgatggccggcgt
agagatgctgatgagaggcctgagctttgtaaaggaacagttgaatttgttgcttcaaaa
gagtacatgattcgcgatccaatgccaaccgtgtattttttcctaattgatgtatccatg
aatgccgtacagactggtgccattgctgcagcttgcagtgcaattagtcaagttattgct
gatcttcctgaaggtccccgaactctagttggaatagcaacatttgactcaacaatccat
ttttataatttaaaacgggcactgcaacagccgttgatgcttatcgttcctgacattcaa
gatgtctatactcctcttgaaacggatgtcattgttcagctttctgagtgccgccaacat
ttagagttgttgcttgaaaacatcccaacaatgtttcagactagtacaactgctgagtca
tgttttggtgcagcaatcaaggctgcattcttggccatgaaaagtactggagggaagctt
cttgtttttcaatcagttttgccatcagttggtattggtgccctttcttctagagaggct
gaaggaagaactaatatttctgctagtgaaaaggaagctcataaattactgcaaccagct
gacaaaattcttaagacactggcaattgaatttgctgagtatcaggtctgtgttgatgtt
tttttaactactcagagttatgtagacgttgcttccatctctgtcatcccaagaactact
ggaggccaggtgtattattattaccccttctctgctgtatctgatcctgcaaagctctac
aatgaccttagatggaacatcactaggccccaaggttttgaggctgtcatgcgtgtaaga
tgcagccagggtattcaagttcatgattactctggaaatttctgcagacgcattccaacc
gacattgacctacctgggattgattctgacaaatgcatattggtaaccttaaagcatgat
gacaaattacaagatggttctgaatgtgcttttcagtgcgcccttctgtataccactgtt
tatgggcaaagaagaattcgagtcacaaacttatccttgccatgcacaaatatgctaagt
aatttgttccgtgctgcggacttagatgctcaattcgcaaatttcttaaaacaagccgca
attgaaattcctacagccccgctaatgcaagtgagggaccaagtgacaaatctttgcatc
aacacactgctttcatatcgtaaattttgcgccacggtatcatcatctggacagcttatt
cttcctgaggctcttaagcttcttcctctatatacccttgcgttaatcaagagtactggg
ttgcgaaatgatggcagaatagatgaccgttccttctggtccaattatgtttcctccctt
tctactcctttggcagtcccactggtttatcccaggatgtttgccatccacaaccttaat
tcaaaggaaggggatgattctattcttcctcctacaatcccactttctagtgaacatgtc
agtgatgatggaatatatctgcttgagaatggtgaggatgttttaataaattttgggagc
tcggtggattcaaatatcatgcaacaactttttggcttcaactcagttgatgaagtcccc
actcagtttgtgatgcggcaatttgacaatcctttatcaaagaagctaaatgatgttgta
aatgtgatccgtcaacaaagatgttcctaccttcgcttcaaattgtgcaagaagggggat
ccattaggaatgctgttcttatcttgcatggttgaagacaagaatgtaggtgggccatct
tatgtcgagtttcttgtacatattcataggcaaatccagatgaagatgtcatga
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