Hibiscus syriacus (Rose-of-Sharon): 120154673
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Entry
120154673 CDS
T09559
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120154673
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120154673
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
120154673
NCBI-ProteinID:
XP_039022273
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All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MLYMNHIVLLFLLTSSSPLAISTFNLTFPVPHPNPNEVAQDVQRRVNTSVSRRQALQNDE
SACLTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYALGGKGGEYYIVTDSSDDDAVTPK
PGTLRYAVIQEEPLWIVFPGNMHIKLKQELIFNSYKTLDGRGANVHITGGGCITLQYISN
VIIHNIHIHHCYQSGEANVRSSPTHYGWRTESDGDGISIFGSKDLWIDHCSLSHCKDGLI
DAVMGSTGITISNNFFSHHNEVMLLGHSDDYEPDSGMQVTIAFNHFGEKLVQRMPRCRRG
YIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNRNAKEVTKRVDTADGDWKGWNWR
SEGDVMVNGAFFVASGAGAEFRYEKAYSVEPKSAVLIDQLTMHSGVLGAGGRDNNLGKWS
SGANGGGIGFDSGDDDDDYSDDMSGSNMPLLSAVFSLFIAMSSFLFLYFKPPPML
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacatgaaccacattgtgttgttgttcctcctaacctcttcttctccccttgct
atatccacattcaacctcacatttcccgttccacatcccaaccccaatgaagtcgctcaa
gatgttcaaaggagagtgaatacttcagtttcaagaaggcaagccctgcaaaacgatgag
tcggcttgccttacagggaaccccatagatgactgctggaaatgtgaccctgactggccc
aacaaccgccagcggctagccgattgcgccatcgggttcgggcagtacgcgttgggaggg
aaaggaggtgagtattacatcgtgacggattcatcggatgacgacgcggtgactccgaag
cctggaacacttagatatgcggtgattcaagaagagccgttgtggattgttttcccgggt
aatatgcacatcaagctcaagcaggagcttatatttaacagctacaagacgttggatggg
cgtggggctaatgtgcacatcactggcggtggttgcattactttgcagtatatcagcaac
gtcattatccacaatatccacattcaccattgttatcagtcaggtgaggcaaatgtgagg
tcaagtccaacgcactatgggtggagaacagaatcagacggtgatgggatctcaatcttc
ggatcaaaggacctgtggatagaccattgctctttatcacactgcaaagatgggttgatt
gatgccgtgatgggatcaacgggaatcacaatatcaaacaacttcttctcccaccacaat
gaggtgatgctgttaggtcacagtgatgactatgagcctgactcagggatgcaggtcacc
attgccttcaaccactttggtgaaaaactggttcagagaatgccgaggtgcaggcgaggc
tacatccatgtggtcaacaatgatttcactcagtgggagatgtatgccattggcggtagt
ggaaaccccaccattaatagccaagggaatcgttacactgcccctactaaccgtaacgcc
aaagaggtaacaaagagagtggatacagctgatggagattggaaaggctggaattggaga
tcagagggagatgtgatggtaaatggggccttctttgttgcatcaggtgcaggtgctgag
ttcaggtatgagaaagcctacagcgttgagcctaaatcggctgtcctcattgaccaactc
actatgcactctggtgttcttggagctggtggcagggacaataacttggggaagtggagc
agcggagccaacggtggtggaatcggtttcgactctggtgacgacgatgacgactattcg
gatgacatgtcgggaagcaacatgccattgttatctgcagttttctctcttttcatagca
atgtcaagttttttgttcttgtattttaagcctccacccatgttatga
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