Hibiscus syriacus (Rose-of-Sharon): 120155024
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Entry
120155024 CDS
T09559
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120155024
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120155024
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120155024
NCBI-ProteinID:
XP_039022541
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MPIHPLSFLFLFTSLLIPSLISSSPVQDPELVVEDVHRAINASRRNLGFLSCGTGNPIDD
CWRCDLNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSSDNDAVNPKPGTLRHAVIQD
EPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC
KQGGNAMVRDSPKHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCNDGLVDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSANPTINSQGNRFTAPDARFSKEVTKHEDAPESDWKNWNWRSEGDLMVNGAF
FTASGAGASSSYAKASSLGARPSSLVATITTNAGALSCKKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccatccactttctttcctcttcctcttcacttctctcctaatcccttctctc
atttcctcttcccctgttcaggaccccgaactcgtagtcgaagatgtgcatagggccatc
aatgcatcaaggaggaaccttggatttctatcttgtggaaccggtaatcccatcgatgac
tgctggcggtgtgacctgaactgggagaagaatcggcagagactagccgactgtgcgatt
gggttcgggaagaatgccattggtggaagagatggtaagatttatgttgtgacagactct
agtgataacgatgcggtgaaccccaagccgggaactttacgacatgctgtgattcaagac
gaaccattgtggataattttcgctcgagacatgacgatccggttgaaggaagagcttatc
atgaattcgttcaagacgattgatggtcggggtgccagcgtccacattgcagggggtcct
tgtataactattcagtatgtgaccaacattatcattcacggattaaacatccatgactgc
aagcaaggagggaatgctatggtgagggactcccccaagcattacggttggcgaaccata
tcggacggcgacggtgtgtccatcttcggcggtagccatgtttgggtggatcataactcc
ttgtccaactgtaatgatggtctggttgatgccattcatgggtccaccgcaattaccatc
tcaaacaactacatgactcaccatgataaagtcatgctcttggggcacagtgattcctac
actcaagacaagaacatgcaagtcacaatagcctttaatcactttggagaagggcttgtc
caaagaatgcctagatgtagacatggatatttccatgtggttaacaatgactacacccac
tgggaaatgtatgccattggaggaagtgcaaacccaactattaacagccaagggaacaga
tttacagcacccgacgccagattcagcaaagaggtgaccaagcatgaagatgcaccggag
agtgactggaagaactggaattggagatcggaaggtgacctgatggtgaacggtgcgttt
ttcacggcgtcgggcgccggtgcctcgtcgagctatgccaaggcttcgagcttgggtgct
aggccatcttcgctggtggcgaccataacgaccaatgctggtgctcttagttgcaagaaa
ggctctcgttgctga
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