Hibiscus syriacus (Rose-of-Sharon): 120155052
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Entry
120155052 CDS
T09559
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
hsyr04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
120155052
04136 Autophagy - other
120155052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120155052
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120155052
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120155052
Others
Specific organelles associated proteins
Auto phagosome
120155052
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120155052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
ATG16
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ASA1
CFAP251_N
Beta-prop_Aladin
Beta-prop_NWD2_C
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Ge1_WD40
WD40_RFWD3
WDR54
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Cytochrom_D1
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
PQQ_2
Motif
Other DBs
NCBI-GeneID:
120155052
NCBI-ProteinID:
XP_039022567
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MSQEEVARRAIKHALKALKKRHLVEEGAHAPAYIALSRPIISQSSEWKEKAENLEMELQQ
CYKAQSRLSEQLVVEVAECRALKASLQEKETAMAEMEMELTQTRDECSQLKVDLEEKVRA
LELVLSEREELKAQLQQLTIRATNAEAENKKLVDRWMLQKMQDAERLNEANALCEDMIEQ
LKVSGLEKLAREQVDGIVRRSEEGAEFFSESYVPSVCKNRINAHEGGCASIMFENNSSRL
ISGGQDRSIKMWDSSTGSLSHSLFGCLGSVLDLAITHDNRSIIAASSSNNLFVWDVNSGR
VRHTLTGHTDKVFAVDVSKVSSRHVVSAAYDRTIKVWDLQKGYCTNTIMSHSNCNALCFS
TDGLTICSGHVDGNLRLWDIQTGKLLSEVAAHSLAITSLSLSRNGNVVLTSSRDNAHNLF
DIRSLEVCGTFRATGSRVASNWSRSCISPDNKYIAAGSADGSIYIWSISKADIVSTLKEH
TAPVLCCTWSGVGKPLASADKNGVVCTWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaggaggtagccaggcgagctataaagcacgcattgaaagcgcttaagaaa
aggcatttagtcgaagaaggagctcacgctcctgcttatattgctctttcccgcccaatc
atttcccagagctcagaatggaaagagaaagctgaaaatttggaaatggaacttcaacaa
tgttacaaagctcaatccagattatctgagcagcttgtagtggaagtagctgaatgcaga
gctttaaaagcttctctacaagagaaagaaacagcaatggctgaaatggagatggagttg
acacaaactagggatgaatgctctcagttaaaagtggatttagaagaaaaggttagagct
ttagagttagtgttgagcgaacgtgaagaactcaaagctcaactacaacaactgactatt
agagctacaaatgctgaagctgaaaataagaagttagtcgatcgatggatgcttcaaaag
atgcaggatgctgaacggcttaacgaggcaaatgcgctgtgtgaagatatgattgagcag
ctcaaggttagtggtttggaaaaacttgcacgagagcaagtagatggtattgtccgtaga
agcgaagaaggtgctgagttcttttcagaatcatacgttccttctgtgtgcaaaaacagg
atcaatgctcatgaaggtggttgtgcttctataatgtttgagaataattccagcagactg
atcagtggaggacaggaccgatcgatcaaaatgtgggattctagcactggatcattaagt
catagtcttttcggctgccttggttccgtccttgatcttgcaattacacacgacaataga
tccataatagcagcaagtagttcaaacaacttgtttgtatgggatgtcaactcaggacgg
gttcgtcatactctcaccggccacacagataaagtgtttgctgtagatgtgagcaaagtt
tcaagtcgtcatgttgtgagtgcagcttatgatcgtactataaaagtatgggatttgcaa
aaaggttactgcactaacacaataatgtctcacagcaactgcaatgctctttgcttcagc
accgacggactgactatatgctcaggtcatgtcgacggtaatcttcgtttgtgggatatc
cagacggggaagttgcttagtgaagtcgcggcacattcacttgctatcacatctctctct
ctgtcccgaaacggaaatgtagtattgactagtagcagagataatgcacacaatttattt
gacatcagatctttggaagtttgtggtacattcagagcaacaggaagcagagtggcatca
aactggagtcgctcgtgtattagtccggacaataaatatattgccgcaggctctgccgat
gggtccatctacatttggtcaatctccaaagctgacatagtaagcactctgaaggaacac
actgctcctgtcctgtgttgtacatggagtggagtgggaaagccattagcctctgctgat
aagaatggggttgtctgtacctggacatga
DBGET
integrated database retrieval system
