Hibiscus syriacus (Rose-of-Sharon): 120155332
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Entry
120155332 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120155332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120155332
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
GTPases
120155332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
SRPRB
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
120155332
NCBI-ProteinID:
XP_039022814
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MSDSDTRKIRNICILAHVDHGKTTLADHLIAATGGGVLHPKLAGKLRFMDYLDEEQRRAI
TMKSSSIALHYKDYEINLIDSPGHMXFCSEVSTAARLSDGGLXLVDAVEGVHIQTHAVLR
QSWIEKVTPCLVLNKIDRLICELKLSPMEAYNRLLRIVLEVNGIMSTYKSEKYLSDVDSL
LAGPAGEVCDENLESIEDDEEDTFQPQKGNVAFVCALDGWGFTINEFANFYASKLGASTS
ALQKALWGPRYFNPKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVYHAALEPDGDKGTL
GKVIKSFNLSIPPRELQNKDPKILLQAVMSKWLPLSDAVLSMVVKCMPDPVSAQSLRISR
LLPKREILDKGADSNVFAEADLVRKSVEACDSSPEAPCIAFVSKMFAVPTKMLPQRGPQG
EILNNFTEEGGTIESDECFLAFARIFSGFLXIRTKTFVLSALYDPLRGESMQKHVQEAEL
HSLYLMMGQGLKPVTCARAGNILAIRGLGQHILKSATLSSTMNCWPFSSMAFQVAPTLRV
AIEPSDPADMGALMKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKDRFAK
VSLEVSPPLVSFKETIEGDISNTLEDLKLFSSGSDYVEKMTSNGRCTIRVKVMKLPPMLT
KVLDESADLLSDIIGGKLGQSAKSLEMHTSSLTENESPIEVLRKRIFDALESDFLCGNEN
DKDQAEKSKGKWFKYLRRIWALGPRQVGPNILFTPDYEMENDDGTILIHGSPYVSLRLGL
ADNSSANDIVAITSSELTQTIYGEAESLESSLMSGFQLSTAAGPLCDEPMWGLAFVVEAY
ISPSIVQAGDSEPNQLSEQYGLLTGQIMTAVKEACRGAVLQRKPRLVEAMYFCELNTPTE
YLGPMYAVLARRRARVLKEEMQEGSSLFTVHAYVPVSESFGFADELRRWTSGASSALLVL
SHWEALPDDPFFVPKTEEEIEEFGDGASVLPNTARKLINAVRRRKGLPVDEKVIQHATKQ
RTLARKV
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactctgatactaggaagattaggaatatatgcatattagcacatgttgatcac
ggtaaaaccacattggctgatcatttgatagccgctacaggtggtggcgtgctgcaccct
aaattagctggtaaacttaggtttatggattatcttgatgaagagcaaagaagagcaata
acgatgaagagttcttctatagctcttcactataaagattatgagattaaccttatagat
tcacctggtcatatgngattttgtagtgaggtgtctactgctgcacggctgagcgatggt
ggattgngtttggttgatgctgttgagggtgttcatattcaaactcacgcagtcttgcgt
caatcttggatcgagaaggttaccccgtgtttagttcttaataagattgataggttaata
tgtgaattgaagttgagccctatggaagcttataaccggttattgaggattgttcttgag
gtcaatgggattatgagtacatataagtctgagaaatatctgtctgatgttgattccttg
cttgctggtcctgctggtgaggtgtgtgatgagaatttggagtctattgaggacgatgag
gaggatacttttcagccccaaaaaggaaatgtggcatttgtctgtgctttggatggttgg
ggttttaccattaacgagtttgctaatttttatgcctctaagcttggggcgagtacatct
gcgcttcagaaggctctctggggtcctcgctatttcaatcccaagacaaaaatgattgtt
gggaagaagggaataggtggaggaagcaaggctcggccaatgtttgtgcaatttgtactt
gaaccactttggcaggtttaccatgctgctttggagccagatggggacaaagggacactt
gggaaagtgattaaatcttttaatttgtctattcctcctcgtgaactgcagaataaggac
ccaaagattttgcttcaagctgtcatgagtaagtggcttcctttgtcagatgcagttttg
tcaatggtggtgaagtgtatgccagatccagtttctgctcagtctcttaggatttcacgt
ttgcttcccaaaagagagattcttgataaaggggctgactctaatgtgtttgcagaggct
gatctagtgagaaagtctgttgaagcttgtgattctagccctgaagccccatgtattgct
tttgtatctaagatgtttgcagttccaacaaagatgcttccccaacgaggtccacagggg
gaaattttaaacaatttcactgaagaaggtggaactattgaatctgatgagtgtttcctt
gcatttgctaggatttttagtgggttcttanngatcaggacaaagacttttgtgctttca
gctctatatgatccattgagaggggaatcaatgcagaagcatgtgcaggaagctgaactg
cattccttatatttgatgatgggtcaaggtctgaaaccagtgacctgtgcaagggctggg
aatattttggcaattcgtggacttggccaacatatattaaaaagtgcaactctttcgtcc
acaatgaactgttggcctttctccagtatggcgttccaggttgcccctaccctaagggtt
gcaattgaaccctctgatcctgcagatatgggtgcacttatgaaaggcctgaggcttctg
aatcgagctgatccatttgtggaggtcactgtttcctctagaggggaacatgtgctggca
gctgctggtgaggttcatctagaaagatgcattaaggatttgaaggatagatttgcaaag
gtgagcctggaagtttctccacctcttgtgtcctttaaagagaccatagagggtgatata
tctaatacattggaggatttgaaactgtttagttctggctcggactatgttgaaaaaatg
acttcaaatggaagatgtaccatccgtgttaaagtcatgaaacttccacctatgctaacc
aaggtacttgatgaaagtgctgatttgctttcagatattatcggaggtaaactggggcag
agtgctaaaagcttggaaatgcatacatcaagtctgactgaaaatgagagtccaattgaa
gtgctcagaaagcgcatttttgatgctctggagagtgattttttgtgtggaaatgaaaat
gacaaggatcaggctgaaaaaagcaaaggtaaatggttcaagtatcttaggaggatctgg
gcacttggtccaaggcaggttggccctaacatccttttcactccagattacgaaatggag
aatgatgatggcacaattctgatacatggctcaccttatgtatctctgagattgggctta
gctgataattctagtgctaatgatattgttgcgattacatcttcggaactgactcaaacc
atttatggagaagcagagagtctggaaagtagtctgatgtctggatttcaactgtctact
gcagctggccccttatgtgatgaaccaatgtggggattagcctttgtcgttgaagcttat
atctctccctcaattgtgcaggccggtgactcagaacctaaccaattatctgagcagtat
ggtcttttaactggacagataatgacagcggtcaaggaggcctgtagaggagctgtgctt
cagaggaagcctaggcttgttgaagccatgtacttctgtgagctgaatacaccaactgag
tatttgggccctatgtatgcagtgcttgcccggaggcgagcccgagttttgaaggaagaa
atgcaggaaggctcttctctttttacagtgcatgcctatgtgccagtttctgaaagtttt
ggttttgctgatgagctaaggagatggacatctggggcttctagtgcccttctagttctt
agtcactgggaagcgcttcccgatgatccattttttgtaccgaaaacagaagaggagata
gaagaatttggtgacggtgctagtgttcttccaaatacagctagaaagctcattaatgct
gtgaggcggcggaagggtttgcctgttgatgaaaaagtaattcagcatgcaacaaagcag
aggacactagctcgtaaagtgtaa
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integrated database retrieval system
