Hibiscus syriacus (Rose-of-Sharon): 120155350
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Entry
120155350 CDS
T09559
Name
(RefSeq) autophagy-related protein 13a-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120155350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120155350
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120155350
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120155350
Atg1 complex
120155350
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120155350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120155350
NCBI-ProteinID:
XP_039022852
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MEMDREPGKLEQIVSQFRSKILHVILESRVPSLHHQQQESLSLSRVRKTDKWFNLVLGDR
PPALENLNFSLRNLLDPMVIDIILVRHGPCSSSVDNLYAPSAAAAGPSTETVIERWVVQY
DCPRVFATPSGAEAAVSYKKIYKKCILLLRSLYSQMRLLPAYRIFRQLSLLSQTYNFDLI
YKVSSFSHPFSREEEDGMKEYNFTPVEAPPGCLCVSVTYRTTLSDFNLEPLVSLPPKIIT
DYVGSPTTDPMRSFPSSERGAHAISFPSRGLRSPSSIPFQRPHSWSSGFHRGIPPTKTQS
LAGSPPAYRTSCKPYDISSPPADLFGNRIQNHRVSTLQQATAYDEYKLSPPFSPSASPST
PTYLTGANPLLTRHCSETAPVTIPLPLTGRSTRYLSPNSSDPSRHSLPPLSPRSSKHDAS
SQESPSGIRSYRKIEALRAGESPSGLSNLYSAPKVVRDSKDDSGRFSGLLSSSGSPRIGF
SRSSSRLSFQDDMDDCEFSCPFDVDDVDVSDSSSQNTESKKASEFTAQSNLVGKKSQDAA
VGILVHLLRTAPPLRQDSSCYSTHSLKTEYDGGVGMASGFFLPRKTADALEELNSYREMK
DLLLSKSGTQAVRKEGMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatcgagaacctgggaaattggaacaaattgtttcccaatttcgttccaag
atattgcacgttattttggagtccagggtcccttctcttcaccaccaacagcaagaatcg
ctttctctttctcgggtgaggaagaccgacaaatggttcaatttagttttaggagatcgt
cctccggctctggagaatctcaatttctcccttaggaatctattggatcctatggtaatc
gacataatactggttcgccatggtccttgttcctcatcagtggacaacctctatgctccg
tcggctgcagctgctggcccttcgactgagactgttatcgaaagatgggttgttcaatac
gattgccctcgggtttttgccactcctagtggtgctgaggctgctgtttcttataagaag
atttataagaaatgcatcttacttttgcgatctctttactcgcaaatgaggcttctccct
gcatatagaatctttaggcagctaagtttgttgagtcaaacgtataatttcgatcttatt
tacaaggtttcatcgtttagtcatccattctctagggaagaggaggatggaatgaaagaa
tataattttactcctgttgaggctcctccaggctgcttatgtgtgtcggtgacctaccgt
acaactctatctgatttcaacctcgaacctttggtgtctttgcctccaaagattataaca
gactatgttggtagccctaccacggatcctatgagatcctttccttcatcagagaggggt
gctcatgctatatccttcccatccagaggactgcggtctccatcttcaattccatttcaa
cgtccacacagctggtctagtggctttcatagaggaatccctcctacaaaaactcaatct
cttgcaggatctccacctgcgtatcgtacatcttgcaaaccatatgatatttcatctcca
cctgctgatttatttggtaatagaattcaaaatcatagagtgtcaactctacaacaggct
actgcttatgatgagtataagctatcacccccattctcaccatctgcttccccatcaact
ccaacatacttaactggtgctaatcctttgcttactcgtcattgttctgagactgccccc
gtaaccattccacttccactaactggcaggagtactagatatctttctcctaactcttcc
gatccaagtaggcattcccttccccctttgtctcctagaagctcaaagcatgatgcctca
tctcaagaatctccatctgggattcgatcatacaggaaaatagaagctctacgggctgga
gagtctccttctggcttgtcaaatctttattccgcaccaaaggtggttagagatagtaaa
gatgactcgggtcgattctcaggattgctatcttctagtggctcacctcgtattggattc
tctagaagctctagtaggttatctttccaggatgacatggatgattgtgaattctcttgc
cctttcgatgttgatgatgttgatgtatctgattcatccagtcaaaacacagagagcaaa
aaagcttcagaatttactgcacagtcaaatctggtaggaaagaaatcacaagatgctgct
gttggcattcttgttcacttgctcagaacggcaccgcctctccggcaagactcgagttgt
tattcgactcattcattaaagactgaatacgatggaggtgtcggtatggcttctggattt
tttctgccacgtaaaacagcggatgcgcttgaggagctcaacagctacagagaaatgaaa
gatctactactatcgaagagtggaacgcaggctgttcggaaagagggaatgaagtag
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