Hibiscus syriacus (Rose-of-Sharon): 120155515
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Entry
120155515 CDS
T09559
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120155515
04120 Ubiquitin mediated proteolysis
120155515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120155515
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120155515
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120155515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_5
zf-RING_16
zf-RING_11
zf_RING_Vps8
zf-RING_Vps41
FAM199X
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120155515
NCBI-ProteinID:
XP_039022986
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MMRLRTYAGLSFVSTLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLAVMCVLWQL
TKRVFLGSLREAEVERLNEQSWREVMEILFATTIFRQEFSVSFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPKLAHVRIVSFLGFLLLLDSLFLYSSIKFLIQTRQASVSIFFGFEYM
ILATTTVTTFVKYVFYVSDMLMEGQWEKKAVYTFYLELVRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVGDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT
SAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPSENGTSSSEGQHGARSDARQQGSST
SSATQSTGVDAATDNLTRHQARLQAAAAAASIYEKSYVYPCANTMVWSPGNAVLPWASSP
LADSMKSESSGESTSIGQQQFAIPGGQANLPFPQFPHCGFFPIQLPGASGNSGEESGSNQ
NISDSQLVAQKKIIQQQIEVLQHQLQILQMQKPKTEESSDVGLVASSGCKGKAVASSSEE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcgaacatatgccggtctcagttttgtatcgactctagcagttatatat
catgcattcaacagcagaggccagttttatcctgctatggtttatttatcaacctctaag
atcagcttggtgttgcttctcaacatgggccttgcagttatgtgtgtcttgtggcaatta
accaaacgagtattccttgggtctcttcgtgaagctgaggttgagaggttgaacgagcag
tcatggagagaggtcatggagatccttttcgcaaccaccatctttcggcaggaattctca
gtttcatttcttgcaatggttacggctttattgttaatcaaggctttgcactggttggca
cagaagagagtcgagtacattgaaacaactccttccgttccgaagttagctcatgttcga
atagtttcttttctgggttttcttcttcttctcgattctctgtttttatacagttctatc
aaatttctgatccaaactcgacaagcttcagtttctatcttctttggttttgagtatatg
atattggccacgacaacagtgactacctttgtaaaatatgttttctatgtaagtgacatg
cttatggaaggacaatgggagaagaaggctgtatataccttctacttggagctcgtccga
gacttgcttcacttatctatgtatttgtgcttctttcttgtgattttcatgaattatggt
gtacctctgcacttaatacgggagctttatgagacattcagaaattttaaaattcgggtt
ggtgattacttgcgctatagaaagatcacctcaaacatgaatgatagattcccagatgca
acacctgaagaactcactgcaagtgatgcaacctgtattatatgtcgtgaagagatgacc
tcagcaaagaagttaatctgtgggcatcttttccatgtacactgccttcgatcatggctg
gagaggcagcagacctgtcctacctgcagagcactggttgtaccgtccgaaaacggaaca
agttcatctgaaggacaacatggagctcggtcagatgctcgtcaacaagggtccagcaca
agttctgctacacaaagtactggtgttgacgcggccactgataatttgacccgccatcag
gccagacttcaggctgctgctgctgctgcgtcaatatatgaaaaatcctatgtttatccc
tgtgcaaacactatggtttggtctccagggaacgctgtacttccctgggcttcttctcca
ttggctgattccatgaagtcagaatctagtggggaaagcacatccattggacaacaacag
tttgccattcctggtggacaggcaaacttaccctttccgcagttcccgcactgtggtttt
tttcctatccagttacctggtgccagtggaaactcaggagaagagtcggggagtaatcaa
aatatttcagattcccagttggtggctcagaagaagattatccaacagcagattgaggtg
ctgcaacatcagctccaaatactacagatgcaaaagccaaaaactgaggaaagctcggac
gtcggtctcgtagcttcatcaggctgtaaaggaaaggccgttgcatcttcttccgaagag
tga
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