Hibiscus syriacus (Rose-of-Sharon): 120155793
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Entry
120155793 CDS
T09559
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120155793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120155793
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120155793
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120155793
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120155793
PBAF complex
120155793
GBAF(ncBAF) complex
120155793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF7685
ZZ
Zn_ribbon_2
CLP1_P
Motif
Other DBs
NCBI-GeneID:
120155793
NCBI-ProteinID:
XP_039023185
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MPASSSSDGRGRWKRRKRERRSKHRLEDKDVVLEEEDNNDGLENSGDDAGVVITDRSLAG
SGESEVLADGGVRISEFPSVVKRTVNRRHGSVMAIVASERAGLIGDIKEHQKIELPVMEN
VSHGQLQAVSTEAADPEKYVITPPPIKEGRGVVKRFGSRVHVLPMHSDWFLPSTAHRIER
QVVPLFFAGKSPDHTPEKYIECRNQIVVKYMDKPEKRITVSDCQGLINGISNEDLTQIFR
FLDHWGIINYCAAAASHEPWKVGSYLREDSNGEVHVPSDALKSIDSLIKFDKPNCRLKAA
DVYSPLSCHDNDASDLDNRIRERLSENYCSSCSQPTPTSYYLSQKEVDTLLCSDCFHDGR
FSSGHSSTDFVRVESTKDYGDLDGESWSDQETLLLLEAMEIYNDNWNEIAEHVRTKSKAQ
CILHFLRLPMDEGQLEDMEFASMPKSVIVSNGDGSGRLHSNMNGRLPGPSLQDTDSESSL
PFTNSGNPVMAMVAFLASAVGPRVAAACAHASLATLSEGENSAKHQPFDQNETEVHPLPE
EKVKSAAKAGLAAASMKAKLFSDHEEREIQRLSANIINHQLKRLELKLKQFTEIETVLMK
ECEQVEKTRQRFTAERTRVVATRFEPARVTSQMSQTSVASPMANRNISNNRQQVISSSPS
QPSISGYGNNQSVHPHLSFMQRQQMFPMGPRLPLTAMQASTSASPNAMFNSPGNTQPTIN
HPLMRSVSRTSSG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcttcttcttcttcagatggtcgaggtcgatggaagcggcggaagcgagagcga
agatcgaagcaccggttggaagataaggacgtggttctagaggaagaggacaacaacgat
ggccttgagaactccggggacgatgccggcgtagtgattacggatcgatctttggcgggt
tccggcgagagtgaggtcctggccgacggtggagttcgcatctcggagttcccctccgtg
gtgaagagaacggtgaaccgtcgtcacggttccgtgatggcgatcgtggcgtctgaacgg
gcgggtttgattggggatatcaaggagcatcagaagattgagctgccggttatggagaat
gtttcgcacgggcagttacaggcggtttcgacggaagccgccgatccggagaagtatgtg
attacccctcctcccataaaggaggggcgtggtgttgttaagaggtttgggagtagggtt
catgtcctgccaatgcattcagactggtttttgccatccactgcacatcgaatagaaaga
caagttgttccacttttcttcgccgggaaatcaccagaccatacgccagagaaatacatt
gaatgtagaaaccaaattgttgtcaaatacatggataaaccagagaagagaattacagtt
tctgattgtcaggggttgataaatggtatcagtaatgaggatttaactcaaatttttcgg
tttcttgatcactggggaattatcaattattgtgcagctgcagcaagtcatgagccatgg
aaagtcggatcctacttaagggaagattcaaatggcgaggttcatgtgccatcagatgct
ttaaagtctattgatagtttgatcaaatttgacaagcccaattgtaggcttaaggcagcg
gatgtttattccccattgtcatgtcatgataatgatgcttctgacttggacaacagaata
cgagagcgcttatctgaaaactattgcagttcttgttcacagcctactcccacttcatac
tatctgtctcaaaaggaggttgatacacttctttgctctgattgcttccatgatgggaga
tttagttctggtcactcgagcacagattttgttagggtagagtcaacaaaagattatggt
gacctagatggagaaagttggagtgatcaggaaacgctattgctgcttgaggcaatggaa
atttacaatgacaactggaatgaaatagctgagcatgttcgtaccaagtcaaaagcacaa
tgcatacttcattttttacgcctacccatggatgagggccaattggaagatatggaattc
gctagcatgcccaaatcagtgattgtttcaaatggagatggcagtggaagattgcactca
aatatgaacgggagactaccaggacccagccttcaagacacagattctgaaagcagcctt
ccttttacgaattctgggaatccagtaatggctatggttgcatttcttgcctctgctgtt
gggcccagagttgctgcagcttgtgcccatgcatccttggcaactttgtctgaaggtgaa
aactcagcaaagcatcaaccatttgatcaaaacgagacggaggttcatccactaccagaa
gaaaaagttaaatctgctgccaaagctggtcttgcagctgcatccatgaaggcaaaacta
ttttcagatcatgaggaacgagaaattcaaagattgtcggctaatatcataaaccatcag
ttgaagaggttggagctaaagctgaagcagtttacagaaatagaaaccgtactcatgaaa
gaatgtgaacaagtggagaaaacaaggcaaaggtttactgctgagaggactcgagttgta
gcgacacgatttgaacctgccagagtaacttcacaaatgagtcaaaccagtgttgcttct
cctatggctaacaggaacatcagcaacaacaggcaacaggtaatatcatcctcgccttca
cagccaagcatttccggatatggcaacaaccaatccgtacatccccatctgtctttcatg
caacgtcaacagatgtttccaatgggcccaaggttgccgcttacagccatgcaggcatcc
acttcggcttcaccgaatgccatgtttaactccccggggaatacgcaacccactattaac
catcctctaatgaggtcagtctctcggactagctcaggttaa
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