Hibiscus syriacus (Rose-of-Sharon): 120155809
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Entry
120155809 CDS
T09559
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120155809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120155809
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120155809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_Zer-1
F-box
F-box-like
LRR_At1g61320_AtMIF1
RsmF_methylt_CI
LRR_8
Motif
Other DBs
NCBI-GeneID:
120155809
NCBI-ProteinID:
XP_039023203
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All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MIAEVGNEDLNLCFEKLMMVAAGHDGVKGVKMNGVGIAEWKDIPLELLLRIVMLVDDRTA
IVASGVCSGWRDAICFGLTRLCLSWCRKNMNNLVLSLAPKFTKLQTLILRQEYPQLEDDA
VETISKYCQDLQDLDLSKSFKLSDRSLYALAHGCPNLKRLNISGCTSFSGEALAYLTNFC
LKLKILNLCGCVKAATDHALQAVGRNCNMLQSLNLGWCDNFGDIGVMSLAYGCPDLRCLD
LCGCVRITDDSVIALANECVHLRSLGLYYCRNITDKAMYSLAQSRMKNKGSMWESMKGRY
DDNGLKSLNISQCTALTPSAVQALCDAFPALHTCSGRHSLVMSGCLNLTSVHCACVVQAH
RPFNSISHTAH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgaagtgggaaatgaagacttgaacttatgctttgagaagctgatgatggtt
gcagctggacatgatggtgttaagggagttaagatgaacggtgtagggatcgccgagtgg
aaagacatcccattggagcttctgttgagaatcgttatgctcgtcgatgatcggacggct
atcgtcgcttccggtgtttgtagcgggtggagggatgccatttgcttcggccttactcga
ctctgtctctcatggtgcagaaagaacatgaacaacttggttctgtctcttgcgccgaaa
ttcaccaagttgcaaaccctgatattgcgccaagagtatccacagctcgaggatgatgcc
gtcgagactatttcgaagtactgtcaagatctgcaggatctggacctcagcaagagtttc
aagcttagtgatcgctcgttgtatgcgttggctcacggttgtcctaaccttaaaaggctt
aacatcagtggctgcacatcgtttagcggcgaagctctagcgtatttgactaacttttgt
ctgaaattaaaaatattaaacctctgtggatgtgttaaagctgcaactgatcatgcattg
caggctgttggacgaaactgcaatatgttgcagtctttaaatctgggatggtgtgacaac
ttcggtgatatcggagtcatgagtttagcatatggatgccctgatcttcggtgcctggac
ttgtgcggttgtgttcgcataacagatgatagcgtgattgctttagcaaacgaatgtgtc
catttgaggtcgctcggactgtactattgtcgtaacatcacagacaaggctatgtactcg
ctggctcaaagcagaatgaagaacaagggttcaatgtgggagtcgatgaaaggtagatat
gatgacaatggcctgaaaagtctgaatataagccagtgtacggccctgactccttcagcc
gtccaggcgttatgcgatgcatttcctgcacttcatacctgctccggaaggcattccctt
gttatgagtggctgcctgaacttaacgtccgttcattgtgcttgtgtggttcaagctcat
cgtccgttcaacagtatttcccatactgctcattga
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