Hibiscus syriacus (Rose-of-Sharon): 120156179
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Entry
120156179 CDS
T09559
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120156179
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120156179
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
120156179
NCBI-ProteinID:
XP_039023514
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All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MDNGALQVTISNPGGIVTGIQYNGIDNLLAVENVEADRGYWDLVWNLAGSKGTKGKFDRI
EATSLEVIVENEDQVELSFTRTWDQSLEGEVVPLNIDKRFVMLSNSSGFYTYAIFEHLRE
WPAFILDRFRVAFKLRKDKFHYMAMADNRQRYMALPDDRLPYRSQTLAYPEAVLLIDPLE
PEFRGEVDDKYQYSCENKSNRVHGWICDDPPVGFWQITPSDEFRSAGPLKQNLTSHVGPT
TLTVMHSVHYSGEDLLLKFGTNEPWKKVFGPIFIYLNSLSDPGDDPLSLWEDAKEQMRIE
VESWPYTFPASEDFLQSDQRGNVSGRLLVKDRYVCNENIPANGAYVGLAPPGDVGSWQSE
VKGYQFWTRTDEDGYFCINDIRTADYNLYAWVPGFIGDYRYDVIITPCEGYDTYMGDLVY
EPPRDGPTLWEIGIPDRTAAEFYIPDPSPMFINKLYVNHPDRFRQYGLWERYADLYPDGD
LVYTVGVSDYTKDWFFAQVTRKDDGNTYRGTTWQIKFKLDRAAKEAETYKLRLALATAHA
AELQVRVNEDDANSPLFSSGQIGKDNTIARHGIHGLYRLYNVDIPGNLLLQGHNIISLIQ
PKATSPFQGIMYDYIRLEGPASSNAIKRP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggataatggtgcacttcaggtgacaatatcgaatccaggtggcattgtcaccggtatt
caatataatggcatcgacaatttgcttgctgttgaaaacgttgaagctgatagagggtat
tgggaccttgtctggaatctagcaggaagcaaagggacaaagggtaaattcgacaggatt
gaggcaacaagtttagaggttatagtggagaatgaagatcaggtggagctttcgtttact
cggacatgggatcagtccctcgaaggtgaagtcgtcccgttgaacatcgacaagaggttt
gtaatgcttagtaattcctctggattctacacctatgcgattttcgagcacttgagggaa
tggcctgctttcatccttgacagattcagggttgcattcaagctgagaaaagacaagttt
cattacatggcaatggcagacaacagacaaagatacatggccctgcctgatgaccgttta
ccttacagaagccaaaccctggcatatccagaggctgtcctactcattgatccgttggaa
cccgagtttagaggcgaggttgatgacaagtaccaatactcgtgtgagaacaagagcaac
agggtgcatggctggatttgcgacgacccgccggtggggttttggcaaataacaccgagc
gacgagtttcgatccgcggggcctctcaagcagaaccttacctcacatgtcggaccgacc
acccttactgttatgcacagtgttcattattctggagaagatttgttattgaaatttgga
actaatgagccttggaagaaagtctttggccccattttcatctaccttaattctttgtcg
gatcctggagatgaccctctttcactctgggaagatgctaaagaacagatgaggattgaa
gttgaaagctggccttatactttccctgcttcagaagactttcttcagtctgatcaaaga
ggcaatgtcagtggcagattactagtgaaagatagatatgtttgcaatgagaacatacct
gccaatggtgcctatgtgggcttagcaccccctggagatgttggatcttggcaaagtgaa
gtcaagggctatcaattctggaccagaactgatgaagatggctatttctgcattaacgat
attcggactgccgactataatctgtatgcttgggtccctggtttcattggagattacaga
tatgatgttatcatcaccccatgtgaagggtatgatacttacatgggcgatctagtatac
gagcctccaagagatggccctacgttgtgggaaatcggaatcccggaccgaactgccgcg
gaattttacattcccgatccgagtcccatgttcatcaacaaattatatgtcaatcatccc
gacagatttaggcagtatgggttatgggaaagatatgcagatttatatcccgatggagat
ttggtctacacagttggggtcagtgactatacaaaagactggttttttgctcaggtcaca
aggaaggacgacggtaacacttatcgaggaacaacatggcagatcaagttcaaactagac
cgtgccgcgaaagaagccgaaacgtacaaattgcgattggcattggctactgcacacgca
gctgagcttcaggtaagggtgaacgaggatgatgcaaactcacctctgttttcaagtgga
caaattggtaaagacaacacgatagccaggcacggcatccatgggctttaccggctttat
aacgtcgatattccggggaatctgctcctccaaggccataacatcatttctttaattcaa
cccaaagccactagtcctttccaagggatcatgtatgattacattcgattagagggccct
gcatcctccaatgcaatcaagagaccataa
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