Hibiscus syriacus (Rose-of-Sharon): 120156954
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Entry
120156954 CDS
T09559
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120156954
Membrane trafficking [BR:
hsyr04131
]
Protein recycling
Others
EARP complex
120156954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
120156954
NCBI-ProteinID:
XP_039024149
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MQQPNLFPFGGVLGNPFLLNGGVGDLSDGGFESSRVFFLVPFLLSQGGGMDLSKVGEKLL
SSVRSARSLGLLPSAPSSDRPDVPARAAAAAAVARALSGLPADQRYNLPSSSEELMSIYG
SKPPSQIVEEIEEEFYEEEFDPIKHILEHIPSEEYELEYFEKQATLRLVQLDRVAEHLSR
NVMEHYEVMVKGMHLVRELEKDLKIANVICRNGRRHLNSSMNEVSRDLVVNTDSKKKQAL
MHLLPVLAELLHARDMQVALESLVEEGNFYKAFQVLSEYLQLLDSLLELSAIQEMSRGVE
VWLGRTLQKLDSLLLGVCQEFKEEGYLTVVDAYALIGDVSGLSEKIQSFFMQEVISETHS
VLKSIVLDENQDVHMQNSRLTCSDLCLQIPESKFRQCFLRTLAVLFKLMCSYHEIMAFQP
ENKVLECSITNAKLMEDQRPGSTYSTVSTTTTSLSDSSERKDYGSGELVSEGRNDDGATS
SSGSPWYQLRKEAITFVSQNLHRGRKNLWQLTTSRVSVLLSASAAASTSIHHFLKNYEDL
NTFILAGEAFCGVEAFEFRQKLKGVCGNYFAAFHRQNVSALKMVLERETWLSLPPEMAQT
ISFAGLVGDGAPLMAASGGRSSNSRVLHIDKSTNKVDTDIKKSGFSPWLRNGNPFLLKVS
CSYKETHNSSPLNGATSVVFEGNADNIHGDVSPHNDDENHINGSNPISEEENEDLLADFI
DEDSQLPSRISKPILSRGYSFHGIDDFTAQTGSSLCVLRSMDKYARLMQKLEIINIEFFK
GICQLFELFFHYIFETFGLQNMNSSAKTSTDSLNYRLKNALSRITQDCEAWIKTSSGSSS
SPTGHADLTPTAPQNTNFGSTASTSVGLKERCAGVDTIALVARILHRSRTNLQSLLLKSN
TTVVEDFFVHLVDAVPDLIEHIHGTTARILLHINGYVDRIANAKWELKELGMEHNGYVDL
LLGEFKHYKTRLAHGGIQKDVQDLLLDCGLEIVAETLIEGLSRVKRCTNEGRALMSLDLQ
VLIDGLQHFVPLNVKPKLQIVETFIKAYYLPETEYIHWARAHPEYSKNQIVGLINLVATM
KGWKRKTRLEALEKIE
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgaatctgttcccgttcggcggcgttttggggaatccgtttttattgaat
ggcggcgttggcgatttaagcgacggtggatttgagagctctagggttttcttcttggtt
ccttttttgctatcccaaggaggtggaatggatttgtccaaggttggggaaaaactcctc
agctccgtgcgttccgcgcgatcacttggtctcttgccttctgccccctcttctgatcgg
cctgatgttccagctcgagctgcagcagctgctgctgttgctcgtgctctttcaggattg
ccagctgatcagagatataaccttccatctagttctgaagaattgatgtcaatatatgga
agcaaacctccgagtcaaatagtagaagaaatagaggaagaattctatgaggaggaattt
gatccaataaaacacatcctggagcatatcccttccgaagaatatgaactggaatatttt
gagaaacaggccacacttagattagttcaactggatagagtagcagaacatttatcccgg
aatgtcatggagcattatgaagtaatggtgaagggtatgcatttggtcagggaattggag
aaagacttgaagattgcaaatgtcatctgtaggaatggcagaaggcatctaaactcatca
atgaacgaggtttcaagggaccttgttgtgaatactgattctaagaaaaaacaggctctt
atgcacttgcttccagtacttgctgagcttcttcatgcacgggacatgcaagtagctctt
gagtctcttgttgaggaaggtaatttctacaaggcatttcaagtactatccgagtattta
caacttctagatagtttattagagctctcagcaatacaagagatgagccgtggggttgag
gtttggctaggaaggactcttcaaaagctggattcgctcttgttaggagtttgccaggag
tttaaagaagaaggctatttaactgtggttgacgcttatgctttaataggagatgtctct
ggtctttctgaaaagatacaaagttttttcatgcaagaagttatctcagaaactcactct
gtgttgaagagtattgttctggatgagaaccaagatgtacatatgcaaaatagcagactt
acctgcagtgatctatgccttcagatacctgaatctaagtttagacagtgtttcttaaga
acactggctgtccttttcaaactaatgtgctcttatcacgaaatcatggcttttcagccg
gagaataaggttttagagtgctcaataacaaatgccaaattaatggaagatcagagacca
ggatcaacttattccacggtgtctacaacaaccacatccttgtctgattcatctgaaagg
aaagattatgggtctggtgaactggtttctgagggtagaaatgacgatggtgctacgtca
agcagtggatctccatggtatcagttaaggaaagaagccataacttttgtgtcacaaaac
cttcataggggacgtaagaatctttggcaacttacgactagcagagtatcagtattgctg
tctgcttcagctgctgcttctacaagcattcatcattttttgaaaaactacgaagatctt
aacactttcatattggccggggaagccttctgtggagttgaggcttttgaattcaggcag
aaattgaagggtgtttgcggaaattattttgctgcatttcatcggcaaaatgtatctgca
cttaaaatggttttggagagggaaacctggcttagtttgccaccagagatggcccaaaca
attagttttgctgggctggttggtgatggagcacccttaatggctgcatctggtggaagg
tcttctaattctagggtccttcacatcgacaaatcaactaacaaagtcgacacagatatc
aagaagagtgggttttctccttggcttagaaatggaaacccgtttttgctaaaagtaagc
tgcagttacaaagagactcacaattcgtccccacttaatggagcaacctctgtggtattc
gagggaaatgctgataatattcatggtgatgtctctccacacaatgatgatgagaatcat
atcaatggctccaatcccatctcagaagaggaaaatgaggatttacttgctgactttatt
gatgaggatagtcagctccccagtcgaatttcaaaacctatcctttcaagaggttactct
tttcatggcattgatgattttacagcacaaactggatcatctctttgtgttctaaggtcg
atggataagtatgcaagattgatgcagaaacttgaaataataaatatagagttttttaag
ggcatatgccaattatttgagttgtttttccattatatatttgaaacatttggtctgcaa
aacatgaattcaagtgcaaagacttcaactgattctcttaattatcggttaaagaatgcc
ttatcgagaataacacaagattgtgaagcgtggataaaaacttcatcaggatcctcctca
tctccaactggacatgccgatttgacacccactgctcctcaaaatacaaattttggttct
acagcaagcacctccgttggtctaaaggaaagatgtgcaggtgttgatactattgccctt
gtagctcggattttgcatagatctagaactaatctccaatcattgcttctgaagagtaat
acaactgtagttgaagatttctttgtgcacctggtggatgctgtgccagatcttatagag
cacatacatgggacaactgcaagaatactgctccacattaacgggtacgttgatcggatt
gctaatgcgaaatgggaattgaaagagcttggcatggagcacaatgggtatgtggatttg
ttgttgggagagtttaagcactacaaaacaaggcttgctcatgggggaattcagaaagac
gttcaagacctcctcttggactgtggactcgaaattgttgcggaaactcttattgaaggt
ctatcccgagtgaagcgttgcactaatgaaggacgagctctcatgtcattggaccttcag
gttttaatcgatggcctacaacactttgtccccttgaacgtgaagccaaagttacagatt
gttgaaactttcatcaaggcttattatctccccgaaactgaatacatacactgggcgcga
gctcacccggaatacagcaagaatcagattgtggggttgataaaccttgtcgctaccatg
aaaggttggaaaagaaaaaccaggttggaagctctggaaaagattgagtga
DBGET
integrated database retrieval system
