Hibiscus syriacus (Rose-of-Sharon): 120157561
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Entry
120157561 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120157561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120157561
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120157561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Laa1_Sip1_HTR5
Motif
Other DBs
NCBI-GeneID:
120157561
NCBI-ProteinID:
XP_039024590
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MPLFISAEELSLISGDGAAVAERADAFIRELNRELETAKAKADAAVITAEQNCSLLEQKF
ISISGELSDLQSQNAQLQSSRDDKLAELAQVQADKHQLHLQTIGKDGEIERLTTEVSELH
KSKRQLLEMIEQKDSEVADKNATIKAYLDKIVNLTDNASQKESRLSETEAVLVRVQATCT
RLSQEKELIERHNTWLNEELTAKVDNLIEIRRTHAELEADMSAKLADVEKQYNECSSSLN
WHKERTRELETKLTSLQEELCSSKEAATSNEERFSAELSTANKLVDLYKESSEEWSKKAG
ELEGAIKALEMHLGQVQDDYKDRLEKEASAKKQVEKEMVDLKEELEKCKAEIEAGRKENE
LNLLPLSTFTTKTWINSNEANDMVEDNHALVPKIPAGVSGTALAASLLRDGWSLAKMYAK
YQEAVDALRHEQLGRREXESILQRVLHEIEEKAVVIMDERAEHERMLEAYNLINQKLQNF
MSERSNLEKTIQELKADLRRRERDNYLAQKEIADLQKQVTVLLKECRDVQLRCAPVGHDF
PSDDATAAPADMRLQPNADIVISELTFKDINGLVEQNVQLRSLVRDLSDQIESKETEFKE
KLELELKKQADEAASKVAAVLRRAEEQGCMIESLHTSVAMYKKLYEEEHKLHQSYSPAAE
AAPDTGRRDLLLLLEGSQEASKKAQDKATERLRCLEEDLAKARGDIIGLRSERDKLALEA
NFTKEKLESVMKEAAHERDKINGVLARNVEFSQLIIDYQKKLRESSESFNAAEENSRKLA
MEVSILKQQKEMLANAERRACDEVRSLSERVYRLQASLDTIQSAEEVREETRALERRKQE
EYVKQIEKEWAEAKKQVQEERDNVRTLISDREQTLKNAMKQVEDMGKELANALHACASAE
ARASVSEAKLADLEKKLKSSESLGIDGGTPSTISANVVADLPMTNEEMEKLKEEAKANRD
HMLQYKNIAQANEDALKQIELAHENFKIEAEKLKKSLEAELVSLKQRVFELENESSLKSE
EVAAATAGKEEALSSALAEITSLKEENAVKSSQIMVLETQISSIKENLDNEHEKWRAAQA
NYERQVILQSETIQELTKTSQELALLKEEASELRKVADAHRIENTELKAKWEMEKTILEE
SRKEAEKKYDELNEQNKILHSRIEAMHIQLAEKDRGSITDSHGDSGMQNVINYLRRTKEI
AETEISLLKQEKLRLQSQLENALKAEANAKATLNAERSNSRAALMTEDGIKSLQDQIREM
NLLRESNMQLREENKHNFEECQKLREVAHKSKIESEALESRLMEKQFELETSKREIEKHE
AEREILEKRVSELLERCRNIDVEEYDRLKNDVQKKEEKLKEKDAQIEEMTNLLSKKQDLI
SKLEQDLANSKSELNEKDKKLNDILQFEANLKSDMEKQKKLVLQFKRRAENFAKEKDQMS
KENQALSKLVEELKQGRRPSNDTTGDQVMKEKEEKDTRIQILEKTVERQREELKKEKDEH
QNEKTKRIKCERTIMEAVRKSEKGKATVLSELEKYQLALKRISEELEKLKQAEGNLPQGT
SVVQLLSGTISDDHASLYLSAAEDFERVARSILTELGTGASSGDVLSVDTSATALIGTAV
PDQGPVNTSSTVPVTSQHQPAKASEERRSIVPKTNTETRKTGRKLVRPRFVKAEERQGDV
EMSEATSHDVDAQGTQQSARKRQASATTELSEDVPVPGETSADVVTPALKKSKGPDSGQE
AAEVQAATLTENLSAPQVTEEVDETVGDITLGSNEEVVDVEKEEADTMEENLEESKEPQV
DGTSEVGLQENKNLSDEVLDKPIGNEMVTDEEPKNLAVQESQQPPLETESEKEEGELDPE
IAADTEGGTDVHNVAGSSDVGGTELGSSPLTSPSRVEDEALVTAAEGDNSPDTVTDDKND
EGDIGEETIGEGFEKTNDGNEQSAVDTDPMPEAAPAAAVVTSGTNESGATSGPQEGEVSK
NTGNSSGTAAAEAEDVKQTSPISGSGSGSSATSTLVNLQERARERAMLRQAGVVGSSTTS
SRGRGRVTIRGRGTRGRSVRGGRAGGAGTQNPDQQ
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgccccttttcatttccgccgaggaactgtcgctgatctccggcgatggcgccgcggtg
gcggagagggccgacgccttcataagggaactaaacagagagctggagacggcgaaggcc
aaggccgatgccgccgtcatcactgccgagcaaaactgctctcttctcgagcagaagttc
atctccatctccggtgagttgtcggacctccagtctcagaacgcacaacttcaatcatct
cgggatgacaaactcgccgagttagcgcaggttcaggccgataagcatcagctccacctc
caaaccattggaaaagatggagagattgagaggttaacaacggaggtgtcggagctacat
aagtcgaagaggcagttgctggagatgattgaacagaaagattcggaggttgctgacaag
aacgctactattaaggcctatctcgataagattgttaacttgactgacaatgcttcacaa
aaggagtctcgattaagtgaaactgaggctgtgttggttcgagtacaggctacttgcaca
cgtctttctcaggagaaggagcttattgagaggcacaatacgtggcttaacgaggagtta
actgccaaagttgacaatcttattgagattcgtagaacacatgctgaacttgaagctgat
atgtctgctaagcttgctgatgttgaaaaacaatacaatgaatgctccagctccctaaat
tggcacaaggaaagaacgagggaactggaaactaagctgacatctctacaggaggaattg
tgctcatcaaaagaggctgctacatccaatgaggaaagattctctgctgaactatcaact
gcaaataagcttgttgacttgtataaagaaagttcagaggaatggtccaaaaaggctggg
gaacttgagggagccataaaagctttagaaatgcaccttggccaagttcaagatgattac
aaggatagacttgagaaggaagcatctgcaaagaaacaggttgaaaaggaaatggtcgat
ttgaaagaggaacttgagaagtgcaaagctgaaattgaagccggtaggaaagagaatgag
ttgaatctgcttccacttagcacctttacaacaaaaacatggattaattcaaatgaggct
aatgacatggttgaggataatcatgcccttgtcccaaagatcccagctggggtttctgga
acggcattagctgcttctcttctccgtgatggctggagtctggccaaaatgtacgcaaaa
tatcaagaggcagttgacgctcttcgacatgagcaattgggaagaagggaanttgaatca
atattgcaaagggtgctacatgaaatagaagagaaagcagtagtcattatggatgaaaga
gcggaacatgaaagaatgcttgaggcatataatttaatcaaccagaaattgcagaatttt
atgtcagaacgctcaaatctagagaaaacaatacaggaattaaaggctgatttgaggagg
cgtgaaagagacaattacctggctcaaaaggagattgctgatcttcaaaagcaggtgaca
gttcttcttaaggaatgtcgtgacgtacaactacgctgtgcacctgttgggcatgatttt
cctagtgatgatgcaactgctgctcctgctgatatgaggctgcagcccaatgctgacata
gttatatcagaattgacattcaaggatataaatgggttagttgagcagaatgtccaactt
aggagccttgtccgtgatctttctgaccagatagaaagtaaagagacggagttcaaggaa
aaactggaattggagctcaaaaaacaagctgatgaagctgcatctaaagttgcagcagtg
ttacggagagctgaagagcaggggtgcatgattgaatcactgcatacctctgttgcaatg
tacaagaagttatatgaggaggaacataagcttcatcagtcttattcccctgcagcagaa
gcagctccagatactgggaggagggatctcttgcttcttctcgaaggttctcaggaagct
agtaagaaagctcaagataaagctactgaacgtttaagatgccttgaagaggatctagct
aaggccaggggtgatattataggtttacggtcagagcgtgacaagttggctcttgaagca
aattttacaaaagaaaaacttgaaagtgtcatgaaagaagctgcacatgagagggataaa
atcaatggtgttctggcaagaaatgtggagttctcacaattgattattgactaccaaaag
aagctacgtgaaagttctgaatcttttaatgcggctgaggagaattctcggaaattggca
atggaggtatctatattgaaacaacaaaaagagatgttagcaaatgctgaaaggagagca
tgtgatgaagttcgcagcttgtcagagagagtttatcgcctgcaggctagtttggatact
atacagagtgcagaggaagttcgtgaggaaacgagagctttggagagaagaaagcaagag
gagtatgttaaacaaatagagaaagaatgggctgaagctaagaaacaggtacaagaagag
agggataatgttcgtactctcatatctgaccgcgaacaaactctgaaaaatgccatgaaa
caagttgaagatatgggaaaagaattggctaatgctttgcatgcttgtgcctctgctgag
gcgagggcttccgtttctgaggccaaacttgctgatctggagaaaaagcttaaatcttct
gagagtttgggtatagatggtggtacaccatccactatttcagcaaatgtggtggcagac
ttgccaatgacaaatgaagagatggagaaactaaaggaggaggcaaaagctaacagggat
cacatgctgcagtataagaacatagcacaagccaatgaagatgcattgaagcaaattgaa
ctggcacacgaaaattttaagattgaggctgaaaagttgaagaaatctttagaagcagag
cttgtttcacttaaacagagggtttttgaacttgagaatgaatcctctttgaaatcagag
gaagtagctgctgcaactgcaggaaaggaagaagctctttcttctgcattagcagaaatt
acaagtttaaaggaggaaaatgcagttaaaagttctcaaattatggtactggagactcaa
atttcttctatcaaagaaaacctggataacgagcatgaaaagtggcgtgcagctcaagcc
aattatgaaagacaggttattctacaatcagagaccattcaggagttgactaaaacttcg
caagaattggctttactgaaagaggaagcatctgagttgcgtaaagtggctgatgcccat
agaattgaaaatactgaacttaaggctaagtgggagatggagaaaacaattcttgaggaa
tccaggaaagaagctgagaagaaatatgatgaacttaatgaacagaacaagatattgcac
agtcgtattgaagctatgcatattcagttggctgagaaagatcgtggttctattacggat
tcacatggtgattctggtatgcagaatgtaattaattacctccgacggacgaaagaaatc
gcagaaacagagatatctctattgaagcaggagaagctacggttgcaatcacaacttgag
aatgctcttaaggcagaagcaaatgccaaagccacacttaatgctgagcgttccaattca
agagcagctttgatgaccgaggatgggatcaagtctctacaagaccagattagggaaatg
aatttgctccgggaaagcaacatgcagcttagagaggagaacaagcacaattttgaggaa
tgccaaaaattacgtgaggtagctcataaaagtaagattgaatcagaagccctagagagt
cggctgatggagaagcaatttgagcttgaaacttctaaaagggaaattgaaaagcatgag
gcagagagagaaatcttggaaaagagggtctctgagttacttgagagatgtagaaatatt
gatgtggaagagtatgatcgtctgaaaaatgatgttcagaagaaggaggaaaagttgaaa
gaaaaggatgctcagatagaagagatgacaaaccttctgtctaagaagcaggatttaata
tcaaaattggaacaagatcttgcaaacagcaagtcggagctcaatgagaaggataaaaag
ttgaatgatattttgcagtttgaggctaatctgaagtcagatatggagaagcagaagaag
cttgtccttcaatttaagaggagagctgagaattttgcaaaagaaaaggatcaaatgagc
aaagaaaatcaagctctttcgaaactggtggaggaattgaaacaaggtaggaggcctagt
aacgatactactggtgatcaagtcatgaaggaaaaagaggagaaagacactagaatacag
attctggagaaaactgttgagagacagagagaagagttgaagaaagaaaaggatgaacat
cagaatgagaaaacaaaacgtatcaagtgtgaacggactattatggaggcggtcaggaaa
agtgaaaagggaaaagcaaccgttttaagtgagcttgagaagtaccaactggctttgaag
cgtatctcagaagaactagaaaagctcaaacaagcagagggcaatcttcctcagggtacc
tcagtggttcagcttctttctggcaccatctctgatgatcatgcttccctgtatctgtct
gctgctgaggattttgagagagtagcacgttcaattctaactgagcttggaactggcgcc
agttctggagacgttctttcagtagacacttctgctaccgccttaataggcacagcagtt
ccggatcagggccctgttaatacatcctcaacagtacctgtaacaagtcagcatcaacca
gctaaagcatctgaagagaggagatctattgtacctaaaaccaatactgaaactcgtaaa
acggggaggaagcttgtccggccacgttttgtcaaagctgaagagcggcaaggtgatgtg
gagatgtcagaagccacatcacatgatgttgatgctcaagggactcaacaatcagctcgc
aagcgtcaggcttctgccacaactgagttgagtgaggatgtaccagttcctggggagact
agtgcggatgtggttacacctgctcttaaaaaatcaaagggtccagattcaggacaagag
gctgctgaagttcaagctgctacactcacggaaaatctcagtgctccacaagtaactgaa
gaagttgatgagactgtcggtgatataactctaggttcaaatgaggaagttgttgatgtg
gagaaggaagaggctgacacaatggaggaaaacttagaagagtcaaaagaaccccaggta
gatgggacgagtgaggttggactgcaggaaaataaaaacttgtcagacgaggtccttgat
aagccaattggaaacgagatggtaactgatgaagaaccaaagaatctagctgtgcaagaa
agccaacagccccctctagaaactgagagtgagaaggaagaaggcgaactggaccctgag
atagcagcagatactgaaggaggtaccgatgtgcataatgtagcgggatcctctgatgtt
ggtgggacagagctaggttcatctcctctgacttcaccttcaagggttgaagatgaagct
ctagttactgcagcagaaggcgataactctcctgacactgtaactgatgataagaatgat
gaaggtgacatcggtgaagagaccattggtgaaggatttgaaaagaccaatgatggtaac
gagcagagtgcggtagacacagatccaatgcctgaggctgcccctgctgctgctgttgtt
acctctggcactaatgagagtggtgcaacaagcggtccacaagagggtgaggtctcaaaa
aacacgggtaattcaagcggtacagctgcagccgaagcagaggatgtgaaacagacgtct
cccataagcgggagcggaagtggaagtagtgcaacctcaacattggtaaatcttcaagag
agggccagggaaagagccatgctaagacaggcaggagtagtcggttcttctaccacttca
agtagaggtcgtggaagggttacgattcgtggtcgaggtaccaggggacgaagtgtgcgc
ggtggacgggcaggtggagcagggacacaaaatcctgatcaacagtga
DBGET
integrated database retrieval system
