Hibiscus syriacus (Rose-of-Sharon): 120157908
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Entry
120157908 CDS
T09559
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120157908
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120157908
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120157908
NCBI-ProteinID:
XP_039024819
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MEETKLRLIFLFSVFTLTPKIWANIAEFDDFWKQREEEAWKTALASYEPSPENITNHLNY
NVNKVLDKARANQTTEFEGVITNRTRRSLRGKHKKNKGPCLATNPIDRCWRCRKNWAKNR
KRLAKCVLGFGYKARGGVDGEYYLVTDNSDDDVVNPKPGTLRHAVIQMRPLWIFFAHDMH
IKLSKELLVQSDMTIDGRGANIHIAYGCGITLQFVHNVIIHNIHVHRIITCQGGLVRDST
DHFGLRTVADGDGISIFGSSNIWLDHISMSECQDGLIDAIQGSTAITISNCHFTHHDHVI
LLGGNESFEKDYYMQVTLAFNHFGKELVQRMPRCRWGFFHVVNNDYTHWKMYAIGGSAHP
TIVSQGNRFIAPNDPNAKEITNRNYAPESEWKHWLWTSEGDLLMNGAFFRTSGTPPTSGF
KFKKKEIIKAKPSTFVRRLTRFAGTLKCKEGSKC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaactaagctaaggcttattttcctcttttccgttttcaccctaactccaaaa
atatgggcaaacattgctgaatttgatgatttttggaagcaacgtgaagaagaagcatgg
aagactgcgttggcctcttatgaacccagtccagaaaatatcaccaatcatctcaactat
aatgtcaacaaggttcttgataaagctagggccaaccaaactacagaatttgaaggcgtt
ataactaatagaacgagaagatccttaaggggtaaacacaagaagaacaaaggtccgtgc
ttggcaaccaatccaattgatagatgttggcggtgcaggaagaattgggctaagaatcga
aaaagattggcaaaatgtgtgcttggtttcggctacaaagctcgtggtggagtggatgga
gaatattatttagtgactgataattctgatgatgatgttgtaaatcctaagccagggact
ttacgtcatgccgtgattcaaatgaggcctttatggattttttttgctcatgatatgcac
atcaaattgtcgaaagagctgttagttcaaagtgatatgacgattgacggtcgtggagca
aacattcatatagcatatggatgtggtattacactccaatttgtgcacaatgtcatcatt
cacaacattcacgttcatcgtatcattacatgtcaaggtggtctagtcagagactctaca
gatcatttcggtttaagaacggtcgccgatggagatgggatttccatctttggatcatca
aatatctggctcgatcatatttcaatgtccgagtgtcaggatggactcattgacgcaata
caaggttccaccgccatcaccatctcaaactgccatttcacccatcatgaccatgtgatc
ttgttgggcggaaacgaatcattcgaaaaagattattatatgcaagtcacactcgcattc
aaccattttggtaaggaattggtacaaagaatgcctagatgtcgatggggattcttccat
gtagtcaataatgactacactcactggaaaatgtatgccattggtggtagcgctcatccc
accattgttagccaaggcaataggttcattgctccaaatgaccccaatgctaaagagata
actaacaggaattatgcaccagaatcagaatggaagcattggttatggacatcagaagga
gatttgctcatgaacggagccttcttcagaacttctgggacacctccaacttctggtttt
aaatttaagaagaaggaaattatcaaagcaaagccgtcaacattcgttagaagacttact
cgttttgcagggacgctcaagtgcaaagaaggatccaagtgctag
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