KEGG   Hibiscus syriacus (Rose-of-Sharon): 120159330
Entry
120159330         CDS       T09559                                 
Name
(RefSeq) protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120159330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120159330
Spliceosome [BR:hsyr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120159330
 Complex B
    120159330
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 RRM_7 CTK3
Other DBs
NCBI-GeneID: 120159330
NCBI-ProteinID: XP_039025870
LinkDB
Position
Unknown
AA seq 972 aa
MSSFSITRKKTPFQKHREEEEAKKKREEDETARLYEEFVASFQGENAPGSKAFVRGGTIN
PNEKFKPNSEGEKSKDGVSVPKKGSRYVPSFIPPPLAAKGKEIEKKKEEERPKEKEKGKS
RNIDHFMEELKHEQEMRERRNQEREHWPDGYHSDNAPSSRFDELPDDFDPSGKLPGSFDD
GDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNR
ADGQAAKDEMQGVVVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGSSVILSGPSG
PPVTSVPNQNSELVLTPNVPDIMVIPPDDDHLRHVIDTMALYVLDGGCAFEQAVMKRGRG
NPLFSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWLPPPLPITKSQE
HEKESTATYAAGRSRRLEPERTLTDPQRDEFEDMLRALTLERSQIKEAMGFSLDNADAAG
EIVEVLTESLTLKETPIPTKVARLMLVSDILHNSSATVKNASAYRTKFEATLPDIMESFN
DLYRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVAPFHSICG
NAPEIEKKINSEDAVDGIKANQDAALAMGKGEAMRELMDLPLAELERRCRHNGLSLVGGR
EIMVARLISLEDAEKQRNYELDDELKLRSSSSRHLSGHRDANAEPESLGLSEWTRYREDE
IHSERKVSVPLAETFPVPHPELKAFTKKDKIDPVLPASKWAREDHDSDDEENRSTRLSSG
SENAGDDPSKADELEFGTRVNTPASSESAINEEQRQKLRRLEVALIEYRESLEEWGIKNA
EDIERRVTVHRKRLESEYGLSDSGDGKFARNRRDGRDGALDSARKRHHSESRSESPPLKS
SDRKRDSENSSEKEQERHRDRGRDRDRGRSHDPESERGRDRERAYLDKSGSRERDEHGRD
RGRERDRRRRIN
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgagttccttttcgatcactcgcaagaaaacgcctttccagaagcacagagaagaggag
gaagccaagaagaagagggaggaagatgaaactgctcgattatatgaggagttcgtggct
tcgtttcaaggtgaaaatgcgccagggtcgaaggcatttgttcggggtggaacaatcaat
cccaatgagaaattcaagcccaattctgaaggtgaaaagtcgaaagatggggtatctgtt
ccaaagaagggaagtaggtatgttccatctttcataccacctcctttggcagccaaggga
aaggaaattgagaagaagaaggaggaggagaggccaaaagagaaagagaagggaaagtct
cggaacattgatcattttatggaggaattgaagcatgaacaagaaatgagggagaggaga
aatcaagagcgagaacattggcctgacgggtatcatagtgacaatgcaccatcgagtcgc
tttgatgaactgcctgatgatttcgatcctagtggaaaactgcctggatcatttgatgat
ggtgatcctcaaacaacaaatctttatgttggaaatctctcaccaaaggtggatgaaaat
tttcttcttcggacttttggaagatttgggcctattgctagtgtgaagataatgtggcct
aggacagaggaagagcgaaggcggcaaagaaattgtggttttgtagctttcatgaataga
gctgatggacaagctgcaaaggatgaaatgcaaggagttgttgtatatgaatatgagttg
aaaattggatggggtaaatctgtttctcttccatcacaagcattacctgctcccccacct
ggacacatggctatccggagtaaggagggtagttctgtaatcttatctggtccttcgggc
ccaccagtcacatctgttccaaatcagaactctgaactggttcttactccaaatgttcca
gatataatggttattccccctgatgatgaccatcttcgccatgtgatcgatacaatggct
ctttatgttcttgatggtggatgtgcctttgaacaagctgttatgaagaggggtcgtggc
aatcctctattcagttttttatttgagcttggctcaaaggaacatacttactatgtctgg
agactatattccttcgctcagggtgatactcttcaaaggtggcgaacagagccttttatc
atgataactggtagtggaagatggttaccacctcctctgccaattacaaaaagtcaggag
catgaaaaggagtccactgccacatatgctgcaggaagaagcaggcggctggagccagaa
cgaacacttactgatcctcaaagagatgaatttgaagacatgctacgggccttgacattg
gagaggagtcagattaaagaagctatgggcttttcattggataatgctgatgctgctgga
gagatagttgaagttttgacagagtccttgacacttaaagagaccccaattccaactaaa
gttgcaaggcttatgctcgtctctgacattcttcataacagcagcgctactgttaaaaat
gcatctgcataccgtaccaaatttgaagcaacattgcctgatataatggagagctttaat
gatttataccgcagtgtgacaggaaggatcacggctgaggcccttaaggaaagggttctg
aaagtgttgcaagtatggtcagactggtttcttttttcagatgcatatgttaatggactg
cgagctacctttcttcgatcgggaaactctggtgtggccccattccattccatatgtggt
aatgcaccagaaattgaaaagaaaattaattcagaagatgcagttgatgggattaaggcc
aatcaagatgctgctttggcaatgggaaaaggtgaagctatgagggagttgatggatctc
ccacttgctgagcttgaaagacgttgtagacataatgggctgtctcttgttggtggtaga
gaaataatggttgcacgactcataagtttggaagatgcagaaaaacaaaggaattatgaa
ctagatgatgagttgaagctccgatctagttctagtaggcatcttagtggtcatagagat
gcaaatgctgaaccagagtctttggggttgtctgaatggactcgttatagagaggacgag
atccattcagaacgaaaagtgtctgtacctctggctgaaacctttccagtcccacatcct
gaactaaaagcattcacaaagaaagataaaattgatcctgttttgccagcctctaaatgg
gctagagaggatcatgacagcgatgacgaagaaaatagaagcactcggttgtcttctgga
agtgagaatgctggtgatgaccctagtaaagctgatgaattggaatttggaactcgtgtg
aatactccagcttcatcagaaagtgcaatcaatgaagagcagaggcaaaagttgagacgc
ctagaggttgctttgatagaatatcgagaatctcttgaggagtggggaattaaaaatgct
gaagatattgagagaagggttactgttcaccgaaaacggctagaatctgaatatggttta
tcagattccggtgatggtaaatttgcaagaaataggagagatgggcgggatggtgcactt
gactctgcaagaaagcggcatcacagtgaaagccgaagtgagagccctcctttgaaatca
tcagacagaaagagggatagtgaaaacagttcagaaaaggagcaagaaaggcacagggac
aggggtagggatagggatagaggtagaagtcatgatccggaaagtgaaagggggagagac
agggagcgagcttatcttgacaaaagtggaagcagggaaagggatgagcatggcagggat
agaggcagagagagggataggagaaggcgaataaattga

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