Hibiscus syriacus (Rose-of-Sharon): 120159929
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Entry
120159929 CDS
T09559
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120159929
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120159929
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120159929
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120159929
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120159929
microRNA pathway
RISC loading complex
120159929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
120159929
NCBI-ProteinID:
XP_039026358
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MSGRGGGGSRGGRGRGRGHDPGHGQPSQPLPRGGGGRGRGRGSSGPTASYTPPPPQAAPV
RQPHPQAAPARQPPPQAAPARQTPPQAALVRRTPPQLAPAHQPSSSAESLGKEVSQKLAL
SPVAATTASSLPPSSTKAISFPRRPGFGTVGTKCTVRANHFLVDVACSDLHHYDVTITPE
VTSKKVNRDILKELSTTYRASHLGNRRVAYDGRKSLYTAGVLPFESKEFVVKLLDTDRGQ
SSSARARRERQFKVAIKLASKPDIHFLKEFLSRRHFECPQETIQVLDVVLRAAPSEKYNV
VGRSFFHPSLGAKGGLGNGIDYWTGYYQSLRPTQMGLSLNIDVSARSFYEPLLVSDFVMK
HFNRPQNLKRPLSDQDRIKVRKALKGVKVQLTYMKYPKTSKIVGISREPISQLMFSLDEK
STKVSVPQYFREKYNIVLEHTYLPAIQTGCEARPVYLPMELCRIAEGQRYIKKLNEQQVR
QLLRATCQRPNIREENVRKMVEVNNFEADELVGKEFGIHVQKELALINARVLPPPMLKYH
DSGKERSVSPGLGSWNMINKKMVNGGRLDFWTCVNFSSKFMNMSNDFCYELVNMCNSKGM
MFRETASIPIRSARSDRIEQTLLDIHRESAGKNTPLQLLIVILPDQTGSYGKIKRICETE
LGIVSQCCKPDIASKFSKQYFENLSLKINVKVGGRNTVLNDAIQKRIPLVSDMPTIIFGA
DVTHPQPGEDSSSSIAAVVASMDWPEITKYRGIVSAQTHRQEIIQDLYKTTQDPQKGLVH
GGMIRELLIAFRRSTNLIPARIIFYRDGVSEGQFSQVLFDEMDNIRKACSSLQEGYMPRV
TFVVVQKRHHTRLFPTERNKSDRSGNVLPGTVVDTHICHPTEFDFYLNSHAGIQGTSKPT
HYHVLYDENGFTADLMQILTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYVEEEMSD
SGSTGGSRKPKDQSADVRPLPSIKDNVKEVMFYC
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcgtggcggtggaggaagccgtggtggaagaggccgtggccgtggacatgat
ccgggtcacggtcaaccttctcagcctttacctcgcggcggcggcggtagaggaagggga
cgtggatcatctggtcctactgcctcttataccccgcctcctcctcaggcggctccggtt
cgccaaccacatcctcaggcggctccggctcgtcaaccgcctcctcaggcggctccggct
cgtcaaacccctcctcaggcggctctagttcgtcgaacccctcctcagttggctcctgct
catcagccttcgtctagtgcggaatcactgggcaaagaggtgtctcagaaacttgcattg
agtcctgtggctgcaactacggcgtcttctcttcctccttcgtcgacaaaggcgattagt
ttcccgagacggccgggttttggtaccgtcggtacaaaatgcacggttagagcgaatcat
tttctagtagatgttgcttgcagtgatcttcatcactacgatgttactataacaccggag
gtaacttcgaaaaaggtaaacagagacattctgaaggagctttctacgacatacagggct
tcccaccttggaaatcggcgtgtagcatatgatggcaggaagagcttgtacactgctggg
gttctcccgtttgagtccaaggagtttgtagttaaattactcgatacagatcgtggccag
agttcatctgctagagcgaggagggaacgacaatttaaggtagcaatcaaacttgcatcc
aagcccgacatacatttccttaaggagtttttgagcagaaggcattttgagtgccctcaa
gaaactattcaagtacttgatgttgttcttagggctgccccatcggagaaatataatgta
gttggaaggtcatttttccatccgtcattaggtgcaaaaggggggcttggtaatggaatt
gactactggacaggatattatcagagtcttcgacctacacagatgggtttatcacttaat
attgatgtgtctgcccggtccttctatgagccacttttggtttcagattttgttatgaaa
catttcaatcgtcctcaaaatttgaaaaggcctttgtctgatcaagatcgtattaaagtg
agaaaggccttaaaaggagtgaaagttcaactaacttacatgaagtatcccaaaacttca
aagattgttggcatatctagggagcctattagtcagctgatgttttctcttgatgagaaa
agtactaaagtttctgttccccagtatttccgtgagaaatacaatattgtgcttgaacat
acatacttgcctgccattcaaactgggtgtgaagctagacctgtctacttgccgatggag
ctttgtaggattgctgagggacaaagatacataaaaaagttgaatgaacaacaagttcgt
caattgttgagagcaacttgtcaacgtccaaatattagggaggaaaatgttagaaagatg
gtcgaagttaataattttgaggcagatgagcttgttggtaaagaatttggaattcatgtt
cagaaagaacttgctttgattaatgcaagagttttacctcccccaatgcttaagtaccat
gatagtggaaaagaacgaagtgttagtcctggcttggggtcatggaacatgatcaataag
aaaatggtcaatggtgggagactggatttctggacttgtgtgaacttctcctcaaaattt
atgaatatgtcaaacgacttttgttatgagcttgtgaacatgtgtaacagcaaaggaatg
atgtttcgtgagaccgcatcaatcccaatccgttcagctcgttctgatagaattgaacaa
actctcttggatattcaccgagagtctgctggcaagaatacgccacttcagttgttgata
gtaatcctacctgatcaaactggctcctatggaaaaatcaagcgaatttgtgagactgag
ctaggtattgtttcacaatgttgtaagcctgatatagcttcaaagtttagcaaacaatat
tttgaaaacctttctctcaagattaatgtcaaggttgggggtagaaatacggtgctgaat
gatgcaattcaaaagagaattccgcttgtgagcgatatgcctacaattatatttggtgct
gatgtcactcatcctcagcctggagaggattcgagttcttctattgctgcggtagttgct
tccatggattggcctgaaataacaaagtaccgtggaattgtctctgcacagacacatcgg
caggaaataatccaggacctctataaaacaactcaggatcctcaaaagggtttagttcat
ggtggtatgataagggaattgctcattgctttcaggaggtcaaccaatttaatacctgca
aggattattttctacagagatggtgtgagtgaaggccagttcagtcaagttttattcgat
gaaatggataatatccggaaggcttgttcctcactccaggaaggatatatgccacgagtt
acatttgttgtggtgcagaagaggcatcatacgcgcttattccctactgaacgcaacaaa
tctgataggagtggcaatgtcttgccaggtacagttgtggatacccacatttgtcatccc
actgagtttgatttttatcttaatagtcacgccggtattcagggaaccagtaaacccacc
cattatcatgtcttgtatgatgaaaatgggttcactgcagaccttatgcaaattctcacc
aacaatttgtgttatacgtatgcgaggtgtacgaaatcggtttccatagtgcctccagct
tattatgcccatctagctgcttttagggcacgatattatgtagaggaagagatgtcggac
agcgggtccactggtggaagccgaaagccaaaggaccagagtgcggatgttcgtcccctg
cccagcatcaaggacaatgtgaaggaagtgatgttctactgctga
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