Hibiscus syriacus (Rose-of-Sharon): 120160057
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Entry
120160057 CDS
T09559
Name
(RefSeq) zinc finger CCCH domain-containing protein 24-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120160057
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120160057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
zf-CCCH
RRM_1
Methyltransf_15
MTS
Methyltransf_4
Ubie_methyltran
PCMT
Methyltransf_11
PrmA
zf-CCCH_2
Ish1
Torus
AviRa
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
120160057
NCBI-ProteinID:
XP_039026446
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MAASPKNQLSETKTLDSATQNPQSNGQDSTQVDTQPLHEAIPSSDPLSTTDANPGEKRKR
EDQDPNMNSSTHPLWKTTLCSYFRRQDGSCSHGSTCRYAHGEEELRSRPDKTWDPTSERA
KKAMKGENGEKLEVKQEEEKEVIMTEMVMDGEDGEECGDPQLSKCLVHLPRKWHADNLRK
FLSEQGITFKSAKKKKGMVVGFVSFESVEQLKSAVEVLEGKTFGNKSLKVADVIPRSFER
KVKSAMAAQTSEDALVKVNAIVSNASNEVEDGVPNDDGSAHDDSTSKVKSARDAVTPLAY
MPYIDQLEHKKNSVMQMLKKLTRNARKACPSGVSLPDWVLKSKERGGLPCELEGIIESPI
VHGYRNKCEFSVGYSRQGKPTVGFMLGNFRKGVTAVEEPVDCPNVSKIACKYASILQEFL
QHSSLPIWNRFKNTGFWRQLTVREGRSVGKVADENFEANISEVMLIVQVCSVGIDDAQVT
SELERLAQVFAEGAATNSPPLPLTVFVVQDHQGISNVAPTDAPLRSIRILQTENSLGLET
ANNVVEARIHDCISNLRFSISPTAFFQVNTLAAEKLYSLAGEWAGLGPDTLLFDVCCGTG
TIGLTLAHRVGMVVGIEMNASAVQDAYKNAEINGIKNCRFICSKAEDVIGSLLKEYLNVS
EEEDQHSSVLESSEKGTLSCEEKDSCTTNAHNDGESSCQEPENRSSENNGRELQNQLQES
SISTDGNSLVQQFKNVVAIVDPPRMGLHPTVVKALRTHARLHRLVYISCNPESLVANAIE
LCTPSPEKVEKGKKDNRGWRNMSSAGLARHRAKSMPLSEPFQPVKAMAVDLFPHTPHCEM
VMLLER
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctccaaagaaccaactttctgaaactaaaaccctagactccgccacccaa
aacccccaatccaacggccaagattcaacccaagtagacacccaacctctacacgaagca
atcccatcgtccgatcccctatcaacgaccgacgccaatcctggagagaaacgcaagcga
gaggaccaagacccgaacatgaactcgtctacccaccccctgtggaaaaccaccctttgc
tcttacttcaggcgtcaagatgggtcctgcagccatggcagcacgtgcaggtacgcccac
ggcgaggaggagctccgctcgcggcccgataagacgtgggacccgacgtcggagcgagca
aagaaggcgatgaaaggggagaatggggagaagttggaagtgaagcaagaagaggagaag
gaggttataatgacggaaatggtcatggatggtgaagatggagaagagtgtggagaccct
caattgagtaaatgcttggtgcatttgccaaggaaatggcatgcggataatttgaggaag
tttcttagtgaacaaggaattacttttaaatctgcaaagaaaaagaaaggcatggtggtt
ggtttcgtgagttttgaaagtgttgaacagttgaaaagtgcagttgaggtactggaagga
aagacttttggcaacaagagtttaaaggttgcagacgtcattcctcgatcatttgagagg
aaagtgaaatcagcaatggctgcacagactagtgaagatgcattggttaaggtgaatgca
attgtttcaaatgcttcaaatgaggttgaagatggtgtgccaaatgatgacggttctgcg
catgatgattcaacctcaaaggtgaaaagtgcacgcgatgcagtcactccccttgcttat
atgccttacattgatcagttggagcacaagaagaattctgtcatgcaaatgctcaaaaaa
cttactagaaatgcacgcaaagcttgtcctagcggagtttcacttcctgactgggttctt
aaatctaaggaacgaggtggtcttccatgtgaactagaaggtataattgaatctccaatt
gtacatggataccgcaacaagtgtgagttttctgttggatattctcgtcagggtaaaccg
actgtggggttcatgctgggaaattttaggaagggtgtgacagctgttgaagaacctgtg
gactgcccaaatgtttcgaaaattgcttgcaaatatgcttcaatcttgcaggaatttttg
cagcattcaagcttaccaatttggaacagatttaaaaatacaggattttggcgtcagtta
actgtcagagaaggaagatcagttgggaaggttgcagatgaaaattttgaggccaatatt
tcagaagtcatgctcattgttcaggtttgttcagttgggattgatgatgcacaagtaacc
agtgagcttgagagacttgctcaagtatttgcagagggtgcagccacaaattctcctcct
cttcctctaacagtttttgttgttcaggatcatcaaggaatatcgaatgtggcaccaact
gatgctccattgcgatcaatacgcatcctgcaaacagaaaacagtcttgggctcgagaca
gccaataatgttgtagaagcaaggattcatgattgtataagcaacctccggttctcaata
tctccaacggcattttttcaggtcaatacacttgctgcagagaaattatattcacttgct
ggtgagtgggctggtttgggtcctgataccttgctgtttgatgtatgctgtgggactgga
acaattggactcacattagcgcatcgtgttggtatggttgttggcatagaaatgaatgct
tctgcagttcaagatgcttataagaatgccgagattaatgggataaaaaattgtagattt
atatgttcaaaggctgaggacgtaatagggtctctgttgaaggagtacctaaatgtttct
gaagaagaagatcaacattcaagtgtcttagaaagtagtgagaaaggaacattaagctgt
gaagagaaagattcgtgcacaaccaatgcacataatgatggagagagctcatgtcaagag
cctgaaaaccgttcttcagaaaataatggaagagagctccaaaatcaacttcaggaaagt
tccatatcaacagatggaaattctttggtgcagcaattcaaaaatgttgttgctattgtt
gatcctccacgtatgggacttcatcccactgtggtcaaagctttacgaactcatgctcga
ttgcacaggcttgtgtatatttcttgcaatcctgaaagcttagtggcaaatgcaattgag
ctctgcacaccatctcccgagaaagttgagaaagggaagaaagacaaccggggctggagg
aacatgagcagtgctggtttagcacgacacagggccaagtccatgcctctttcagagcct
ttccaacctgtaaaagcaatggcagttgatcttttcccacatacaccacactgtgaaatg
gtgatgctcttggagcgatag
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