Hibiscus syriacus (Rose-of-Sharon): 120160230
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Entry
120160230 CDS
T09559
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120160230
Enzymes [BR:
hsyr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
120160230
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120160230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Serglycin
Motif
Other DBs
NCBI-GeneID:
120160230
NCBI-ProteinID:
XP_039026576
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MASNKNKGAKSKNLPPKKKQRSNLFAEKNRPTKKDEVFDDASDDQSEEQLEAAEDLLDGD
EEVSDFGDASDISDDDDDAPLADDFLQGGDDDEDSDSGSISGSGSDSDESDIEEKSRALD
EQRAREEEDAQAEMQMNIKEESDEFRLPTKEELEEEQQRPPDLANLQMRIKDIVRVLSNF
KDLRQEGATRKDYIDQIKMDLGSYYGYNEFLIGVLVDMFPVVELMELIEAFEKPRPTCIR
TNTLRTRRRDLADTLSKRGVELDQLSKWSKVGLVVYNSHVPIGATPEYLAGFYYIQGASS
FLPVMALAPQEKERVIDMAAAPGGKTTYVAALMKNSGLIFANEMREARLKSLTANLHRMG
VTNTIVCNYDGRELPKVLGQNSVDRVLLDAPCSGTGVISKDPSVKTSKSLDDIQKCAHLQ
KQLILAAIDMVDANSKSGGYIVYSTCSMMVPENEAVIDYALKKRDVKVVPCGLDFGCPGY
IRFREHRFHTSLENTRRFYPHVHNMDGFFVAKLKKMSNTKKNPVSSDGLETVEQKPEEIH
SDEDNIKEHEQPIMKQSTKGKKKNGLPGNGKVESPPPLKNKEKSENGKVESPATSKKRKR
KFPSKEEISKAREEKRKAMRDGKKQARADKKIGK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaataagaacaaaggagcaaaatcgaagaacctacctccaaaaaagaagcaa
cgaagcaatcttttcgctgaaaaaaaccgacccaccaaaaaagatgaggtatttgatgat
gcttcagatgaccagagtgaagaacagttagaagctgcagaagacttattggatggggat
gaggaagtatctgattttggtgatgcttctgatatttcggacgatgacgatgatgcgcca
ttggctgatgatttccttcaaggaggtgatgatgatgaagacagtgattcaggctctata
tcaggttcaggttccgattcagatgaatctgatattgaggagaagtcaagggctcttgat
gaacaaagggcgagggaagaagaagatgcacaggctgaaatgcagatgaacattaaagaa
gagtctgatgagttcagattgccaacaaaagaggaacttgaagaagagcaacaacgtcca
cccgatcttgcaaatcttcagatgagaataaaagatattgttcgagtgctttcaaatttt
aaggatttgaggcaagagggagccacaaggaaggattatattgaccagattaaaatggat
ttgggatcatactatggttacaatgaattcctgataggggttttggtggatatgtttcca
gttgttgaactcatggaactcattgaagcttttgaaaaacctcgacctacatgtattagg
acaaacacattaaggactcgcaggagggatctggctgatactctctccaaaagaggagta
gagctggaccaattaagcaagtggtcaaaagtcggattggtggtgtataattcacatgtg
cccattggtgccactccagagtatttggctggcttttactatatacaaggtgcaagctct
tttttgccagttatggctcttgctcctcaggaaaaggaacgagtaattgatatggcagct
gcacctggtggtaaaacaacttatgtcgctgctctcatgaaaaatagtggattaattttt
gcaaatgaaatgagggaagcaaggctgaagtcacttaccgcaaatttgcatcgcatgggg
gtgacaaacacaatagtttgtaactatgatgggagggagcttcccaaggttttgggtcag
aattcggttgatagagtattgctggatgccccttgtagcggtacaggagttatatctaaa
gatccatctgttaaaacctctaaaagtttagacgacatacaaaaatgtgcccatttgcag
aagcaattgatacttgctgctatcgacatggttgatgcaaattctaaatctggtggatac
attgtttactcaacatgctccatgatggttccagagaatgaagcggtcatcgactatgca
ctcaagaagagagatgtcaaagtagtaccttgtggacttgacttcgggtgtccagggtat
atccgttttagggagcatcggtttcatacatccttggaaaacacaaggcgattttatccc
catgttcacaatatggatggattttttgtggccaagttgaagaaaatgagcaatacgaag
aagaatcctgtaagttctgacggtttagaaacagtagagcaaaagccagaggagatacat
agtgatgaggacaacataaaagagcatgaacaaccgataatgaaacaaagcacgaaaggg
aaaaagaagaatggcttacctggaaatgggaaggttgaatcaccaccaccattgaaaaac
aaggaaaaaagtgaaaatggaaaggtagaatccccggcaacatcgaaaaagaggaaaaga
aaatttccttctaaagaggaaatatcaaaagcgagggaagagaagagaaaagcaatgagg
gatggaaagaagcaagcaagggcagataagaagattggaaaatga
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