Hibiscus syriacus (Rose-of-Sharon): 120160304
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Entry
120160304 CDS
T09559
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120160304
03015 mRNA surveillance pathway
120160304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120160304
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120160304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120160304
NCBI-ProteinID:
XP_039026659
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MAKPTRARRSPSVSGSGSSSRSRSRSYSGSDSKSSSRSRSLSRSASPSRSRSKSFSSSSR
SASSRSRSPPQRRSQADTSKRDRSPPPQSKKTSPAPRKTSPIRESLVLYVDSLSRNVNEG
HLREIFGNFGEVVNVELAMDRALNLPRGYGYVEFKTRADAEKALLYMDGAQIDGNVVRAK
FTLPPRPKISSPPKPIATATKRDAPKSDNVNADTERGGAKRPQEPSPQRKPPLSPRRRSP
VGRRGGSPRRPPESPRRRLDSPVRRRGDTPPRRRPASPARGRSPLSPPRRPRSPARTSPR
RMRGSPIRRRSPPPRRRSPPRRARSPPRRSPTNRRRSPSPIRRRSRSPIRRPLRSRSRSI
SPPRGRGPAARRGRSSSYSRSPSPRKVGRKISRSRSPRRPLRGRSSNSSSSSSPPRKT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccgacgagagcccgtcgctcaccttctgtctccggctctggttcctcttcc
cgttctcggtctcgctcttactccggctcagattccaagtccagttctcgctctcggtcc
ctctctagatctgcttctccatcccgctcgcgctccaaatctttctcatcttcctctcgt
agcgctagttctcgaagtcgcagccctcctcagcgtcgaagtcaggctgacacatctaag
cgagatcgttcacctcctccacaatctaagaagacatctcctgctccaaggaagacttct
cctatccgtgaatcactggttctttatgttgactcactgagcagaaatgttaatgaaggc
catctaagagaaatattcggtaattttggtgaagttgtaaatgtggagcttgcaatggac
cgtgctcttaatcttccaagagggtatggctatgttgaattcaagacgagagcagatgct
gaaaaagcgttactctacatggatggtgctcagattgatggcaatgtagtaagagcgaag
tttactcttcctccacgaccaaaaatttcttcaccgccaaagccaattgctactgctact
aaaagagatgcccccaaatctgataatgtcaatgctgatactgagaggggtggggcaaaa
cgaccacaagaaccttctcctcaacgcaaacctccactgtcaccacgaaggagatctcct
gtgggtcgaagaggtggatctcctagaagaccaccagagtctccacggcggcggctggat
tctcctgttcgtcgtcgtggtgatacacctcctaggcgccggccagcctctcctgccaga
ggtcgttctccattgtcccctccaaggcgacctcgatctccagcaaggacctctccgcgt
aggatgcgtggtagtccaatccgaaggcgttctccacctccaaggcgccgttcacctcct
agacgagcccgtagccctccaagaaggtctcccaccaatcgtagacgtagcccttctccg
attcgtagacggagccgttctccaattcgtagacctctgcgttctcgttcaaggtcaatc
tcacccccaagaggcagaggacctgcagctagacgggggagatcatcatcctattcccga
tcacctagtccccggaaggtcggacggaagatttcaaggagtcgcagtcctaggaggcca
ttgagaggaagaagcagtaacagcagcagcagcagttcgcctcctcgtaagacgtag
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