Hibiscus syriacus (Rose-of-Sharon): 120160346
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Entry
120160346 CDS
T09559
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120160346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120160346
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120160346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
120160346
NCBI-ProteinID:
XP_039026702
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MKFPDDSRLDSTIINSVFDQILFVIQKDKMESDLGKLFIGGISWDTDEERLKEYFGKFGE
VVEAIIMRDRFTGRARGFGFIVFADPAVAERVITDKHMIDGRMVEAKKAVPRDDQNILNR
NMSGITGSHVPGRTKKIFVGGLASSVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGF
ITYDSEEAVDRVLHKTFHELKGKLVEVKRAVPKELSPGPTRNPVIGYNYGLSRVANFLNS
YAQGYNRSPLSDFGVRMDGSFNPLPTVRSGFPQFSTTGYGLGMDMDPGMSPDYGGSSNFG
NSLGYGRIISPYYGGISNRYNTPIGYGVGSGSGRNDSNSATRDIWGNGGLTNATNASDPS
GFLGTGRGSVGPLGSSGGNWSAAASVQSGGNASGYTGGTAGYGSTDDNHGLGGGGYGRNS
GTVAAPTSSFSGPTGNFKGSYGDLYHSGSVYGDSAWQSTAPDLDGPSSFSYGLGNVSSNV
TAISSEDYAGSYSVASRQSNRGIAA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttccagatgattctagattggattccacaatcatcaactctgtttttgatcag
attctgtttgtaattcaaaaagataagatggaatcagatcttggtaaactcttcattggt
gggatatcttgggacaccgatgaggaacgtctcaaggagtatttcgggaaatttggagaa
gtggtggaggcaattatcatgagagaccgatttacaggtcgtgcccgtggtttcggtttc
attgtctttgctgatcctgctgttgctgagagagtaattactgataaacatatgatcgat
ggtcgcatggttgaggcaaagaaggctgttcctagggatgatcagaacattttaaaccgg
aatatgagtggcatcactggttctcatgttcctggacgcaccaaaaagatttttgtcgga
ggtttagcctcatcggtcaccgagagtgactttaagaactactttgatcagtttggtaca
attacagatgttgtggtgatgtatgatcataatacacaaaggccaagaggatttggcttc
atcacttatgattcagaggaagcagtagatagagttctgcacaaaacatttcatgaactc
aaagggaaattggtggaggtcaagagggcagttcctaaagaactatcacctggccccacc
cgcaaccctgtgattggatataattatggtttgagtagggttgccaatttcctcaatagt
tatgctcagggatataatcgtagcccactttcggactttggtgttaggatggatggtagc
tttaatcctcttcctactgttcgtagcggatttcctcaatttagtaccactggatatgga
ttaggtatggatatggatccgggaatgagcccagactatggtgggagttccaactttggc
aatagtctaggatatgggcggataattagcccctattatggtgggatttcgaacaggtat
aacactcctattggatatggtgttggaagtggaagtggaagaaacgattctaattctgct
actcgggatatctggggaaatggaggccttacaaatgccacaaacgcttccgaccctagt
ggtttcttggggactggaagggggagtgttggtcctttaggaagtagtgggggtaattgg
agtgctgctgcttctgtgcaaagtggaggcaatgcttctggctataccggtgggactgcc
ggttacgggagtactgatgacaaccacggtttaggagggggaggatacggaagaaacagt
ggcactgttgctgctccgacatcatctttttctggaccaaccggtaattttaaggggtct
tatggggatctttaccatagtggttcagtttatggtgattcagcttggcagtccacagct
cccgacttggatggtcctagctcgttcagttacgggcttggcaacgtttcctcaaatgtt
actgcaatatcctccgaggattatgctggaagttacagtgttgcaagtagacagtccaat
agaggaatcgctgcctag
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