Hibiscus syriacus (Rose-of-Sharon): 120160470 Help Entry 120160470         CDS       T09559                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism hsyr  Hibiscus syriacus (Rose-of-Sharon) Pathway hsyr03018   RNA degradation Brite KEGG Orthology (KO) [BR:hsyr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     120160470  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hsyr03019]     120160470 Messenger RNA biogenesis [BR:hsyr03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      120160470   mRNA degradation factors    5'-3' decay     Decapping complex      120160470 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Pro-kuma_activ Motif Other DBs NCBI-GeneID:  120160470 NCBI-ProteinID:  XP_039026816 LinkDB All DBs Position Unknown AA seq 796 aa AA seqDB search MDASENPERIGDTSTGDAVFDASQYAFFGKDVLEEVELGGLDDDEEELPAVGLDDEEFLF NREEGEVLRPLSDIDDLANTSSKLDTAFSGPRGSGIIGDGGSRQSSSAAEWTHGEEFPYW LGQQPLGTESIPEGKCRSAQPLANLEPMHIYRTSSYPEQKQQLPPQQQHQYRQNFSSEPI LVPKSSYTSYPSPEGRSPQASPNQHAGHLNIPYMVGGPRMASLPNLSAFSNSQLQPPGLC RGPPFCGNIPQFAPGLSVSNQPSNQWGSQAKLYGDDSCILNNMLQKQLSNQNGLVPPQLM PQLQSHLQRLQHPSQPSVGQFSGIQSQLFNPHHSPSPSQMNKIETILGIGDLRDQRVKSA QKGRQNLRFLQQCFDSGRLKSNLGWPQFRSKYMSTDEIEGIVRMQLVATHSNDPYMDDYY HQGCLARKSAGAKLRHHFCPTQIKDLPPRARSNSEPHAFLQVDALGRVPFSSVRRPRPLL EVDPPNSSVVTNKDKKASDMPLEQEPLLAARVTIEDGICLLLDVDDIDRFLQFNQLQDGG AQLRQRRQTFLEELATSLQLVDPLGKNGHTDELAQKDDLVFLRIVSLPKGRNLLARFLRL LPPGGELMRVLCMSIFRHLRLLFGALPSDPGAAETTINLARVVSSCVHEMDLRALSVCLA SVVCSSEQPPLRPIGSPAGDGASFILKSVLDRATKIVTDSRAACYYNTTNLPLWKASFDE FFNLLTKYCINKYDTVMQSVRMQAKPSMAIDGSDAAKAIKREMPIDLLQACLPHLNDQQK KQLWDLSQRPMLVGQS NT seq 2391 nt NT seq  +upstreamnt  +downstreamnt atggatgcttctgagaatcctgagcgaattggcgatacttctacaggagatgcagtattc gatgcatcgcaatatgctttttttgggaaagatgttctcgaggaagttgaattgggggga ttagatgatgacgaggaggaattacctgcagttggacttgatgatgaggagtttttgttt aatcgagaggagggtgaagttttgagacccttatcagacattgatgatcttgctaataca tcttcaaagttggacacagcttttagtggaccaagaggttcggggataattggtgatggg ggatccagacaaagttcatctgctgcagaatggacacatggggaggaatttccttactgg cttggtcagcagccacttggaactgaaagcattcccgaagggaaatgccggtcagcacaa cccttggccaatttggaaccaatgcatatctataggacatcctcataccccgagcagaag cagcagcttccgccacagcaacaacatcaataccgtcaaaatttctctagcgaaccaatt ttagttccaaaatcttcttatacttcatacccttcccctgagggcagatctcctcaggct tcaccgaaccaacatgctggacacctaaatattccttatatggttggtgggccacggatg gcatctttgccaaacctatctgccttctcaaattctcagcttcaaccgcctggcttatgt cgtgggccacctttttgtgggaatattcctcaatttgctcctggcctgtctgtcagtaat cagccgtcaaatcaatgggggagccaggcaaaattgtacggggatgattcctgtattttg aacaatatgttgcaaaaacagttatctaatcaaaatggtttggttcctccacaattaatg ccacagctgcagtcgcacctgcagagactgcagcatccttctcagccttcagttggccag ttttcagggattcagtcacaattatttaatcctcatcattctccttccccatctcaaatg aacaagattgagactatacttggcattggtgatctgagagatcaaagagtcaaatcagct cagaaaggtaggcagaatctacggtttttgcagcagtgttttgacagcggtagactgaag agcaatcttgggtggcctcagtttagatccaaatacatgtcaactgatgagattgagggc attgtcagaatgcagcttgttgcaacccacagtaatgacccctacatggatgattattac caccagggttgtcttgcaagaaaatctgctggggcaaagttgagacatcatttctgccct actcagattaaggaccttcctccccgagcacgttcgaattccgagcctcacgcttttctc caggttgatgctcttgggagggttcctttctcttcagttcgcaggcctcgccctcttctt gaagttgaccctccaaattcatctgttgtcaccaacaaagataaaaaagcttctgatatg cccctggaacaggaacctttgcttgctgctagagttactatagaggatggtatatgcctt cttcttgacgtcgatgatattgataggtttttacagtttaatcagttgcaggatggtgga gcccaactgagacaaagacgacagactttcttggaggagctggcaacatcacttcagttg gttgacccacttggcaagaatggtcatacagatgagcttgctcagaaggatgatcttgtg tttttacggatagtttccctccccaaaggccggaatctacttgcaaggttccttaggctt cttcctccaggtggtgagctcatgcgagttctctgcatgtccattttccgtcatttaagg ctcttgtttggggcccttccctctgatccaggagctgctgaaactactattaaccttgca agggttgtttcctcgtgtgttcatgagatggatctccgtgctcttagtgtttgtcttgca tctgttgtttgttcctcagagcagccccctcttcgtcccattggaagtcctgctggagat ggggcatcttttattctgaaatctgttcttgatagggcaacaaaaattgtgactgattct agagctgcttgctattataatacgactaatctgcccctttggaaggcttcatttgatgaa ttctttaaccttcttactaagtattgcataaacaaatatgatactgtgatgcagtccgtg cgaatgcaggccaaaccaagtatggcaattgatggatcagatgctgcgaaagctattaaa agggaaatgccaattgatctcttacaagcatgtttaccccaccttaatgaccagcagaaa aagcagctttgggatctctctcaacggcctatgcttgtagggcagtcatga

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