Hibiscus syriacus (Rose-of-Sharon): 120160488
Help
Entry
120160488 CDS
T09559
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120160488
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120160488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120160488
NCBI-ProteinID:
XP_039026833
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MHVPSLSLLFTSLLFPSLISSSPVQDPELVVQDVHRAINASRRNLGYLSCGTGNPMDDCW
RCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSSDNDVVNPKPGTLRHAVIQDEP
LWIIFARDMTIRLKEELLMNSFKTIGGPCITIQYVTNIIIHGLNIHDCKQGGNAMVRDSP
QHFGWRTISDGDGVSIFRGSHVWVDHNSLSNCNDGLVDAIHGSTAITISNNYMTHHDKVM
LLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANP
TINSQGNRFTAPNARFSKEVTKHEDAPESEWKSWNWRSEGDLMVNGAFFTPSGAGASSSY
AKASSLGARPSSLVATITTNAGALSCKKGSRC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcccttctctctctctcctcttcacttctctccttttcccctctctcatttcc
tcttcccctgtccaagaccctgaactcgtagtccaagacgtgcacagggccatcaatgct
tcaaggaggaaccttggatatctgtcttgtggcaccggcaaccccatggacgactgctgg
cggtgtgacccgaactgggagaagaatcggcagaggctagccgactgcgccattggtttc
ggcaagaatgccattggtggaagggacggtaagatttatgttgtgactgattcgagtgat
aacgacgtcgtgaaccccaagccgggaactctacgacatgccgtgattcaagacgaaccg
ttgtggatcattttcgcccgtgacatgacgatacggttgaaggaagaactgctgatgaac
tcgttcaagaccatcgggggtccttgtataacaattcagtatgtgaccaacatcattatt
catggactcaacatccatgactgcaagcaaggaggcaatgctatggtgagggactccccg
cagcatttcggttggcgaacgatatcggacggcgatggagtgtcgatcttccgcggtagc
catgtttgggtcgatcataactccttgtccaactgcaacgatggcctggtcgatgccatt
catgggtccaccgcaatcactatctcaaacaactacatgacacaccatgataaagtcatg
cttttggggcacagtgattcctatactcaagacaagaacatgcaagtcacaattgccttt
aatcactttggagaagggcttgtccaaagaatgcctagatgtagacatggatatttccat
gtggttaacaatgattacacccactgggaaatgtatgccattggtggaagtgcaaatcca
accattaacagccaagggaacagatttacagcaccaaatgccagattcagcaaagaggtg
actaaacatgaagacgcaccagagagtgaatggaagagctggaactggagatcggaagga
gacttgatggtgaacggtgcatttttcaccccgtcgggtgccggtgcttcgtcaagctat
gccaaggcttcgagcttgggagccaggccatcttcattggtggcgacgataacgaccaat
gccggtgctcttagttgcaagaaaggctcccgttgctga
DBGET
integrated database retrieval system