Hibiscus syriacus (Rose-of-Sharon): 120161272
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Entry
120161272 CDS
T09559
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120161272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120161272
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120161272
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120161272
Coactivators
SAGA/TFTC/STAGA complex
120161272
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120161272
STAGA complex
120161272
TFTC complex
120161272
SAGA complex
120161272
SLIK complex
120161272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
120161272
NCBI-ProteinID:
XP_039027476
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSIVAKETIEVIAQSIGINNLSDDAALSLAPDVEYRMREIMQEAIKCMRHSRRTILTTDD
VDGALNLRNVEPVYGFTSGGPLQFKRAIGHRDLFYIDDRDVDLKEVIEAPLPKAPLDTRV
VCHWLAIEGVQPAIPENAPVGVIAAPTNGNTYKQKDELPVDIKLPVKHVLSRELQLYFDK
ITELTLRKSDSALFKEALVSLATDSGLHPLVPYFTFFVADEVSRGLNDYSLLFALMRVVW
SLLQNPHIHIEPYLHQLMPSVVTCLVSKKLGNRIGDNHWELRDFTAKLVASICKRFGHVY
NTLQTRLTKTLLNALLDPQRALTQHYGAIQGLAALGPNVVRLLILPNLEPYLRLLEPELL
LEKQKNEMKRYEAWRVYGALLRAAGQGIYERLKIFPPLPSPPGHAIWKSKEKVFTAVPNK
RKANMEPLEDEPALKKIATDSPIGSLVSANSLPSVTTLASLGQNDAGQPSSSEKMAKRVG
KYGQMLKKSVILNQIWKDDLNSGHTLVTLFELLGEGILSFIPSPEMSLFL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtggcaaaggagacgatcgaggttatagctcaaagcattggcataaacaat
ttgtcagatgatgctgccctttctcttgctcccgatgtcgagtaccgcatgcgcgagatt
atgcaggaggccatcaaatgtatgcgtcactcgaggaggaccatattaactacagacgat
gttgatggtgcacttaacttaagaaacgttgagcccgtatatggctttacatctggaggt
cctttgcagttcaaaagggcaattgggcatagggatttgttttacattgatgatagggat
gtggatttgaaagaggttattgaggctcctttaccaaaagcaccacttgataccagagtt
gtttgtcactggctcgctatcgaaggagtacaacctgccattccagagaatgctcctgtg
ggagtaattgctgctcctactaatggcaatacttacaaacaaaaggatgaacttccggtt
gacattaaattacctgttaagcatgtgctatctagggagcttcagctctattttgacaaa
atcacagagcttactttgagaaagtctgattcagccctgtttaaagaagcattagtgagt
ttggctacagattcaggacttcatcctttagttccttatttcactttctttgtagctgat
gaggtttcacgtggtttgaatgattattctcttctatttgctttaatgcgtgttgtttgg
agtcttctccagaatccccacatacacatagaaccttatctgcaccaattgatgccatct
gtagtgacctgccttgtttcaaaaaaactagggaaccggattggtgacaaccactgggaa
cttagagattttactgcaaagttagttgcttcaatatgcaaaagatttggccatgtttat
aacacccttcagacacgtcttacaaaaactttactcaatgcacttctggacccacaacgg
gcattgactcaacactatggtgcaattcaagggttggcagccctaggaccgaatgtggtt
cgtcttcttattctgccaaatcttgagccatatcttcgactccttgaaccagagttgcta
ttagagaagcaaaagaatgagatgaagagatatgaagcatggcgggtttatggtgcctta
ctgcgtgcagcaggtcaaggcatatatgagcgcctcaaaatatttccacctttaccatca
cctccaggccatgctatctggaagtccaaagaaaaagtttttactgcagttccaaataaa
cgaaaggcgaacatggagcccttggaagatgaaccagccttgaagaaaatagcaactgac
agcccaattggcagtttggtttcagccaactccttgccatccgtgacaacacttgcatca
ttaggtcagaatgatgcaggccagccatcatcatctgaaaagatggccaagagagttgga
aaatatggtcaaatgttgaagaagtcggtcatccttaatcaaatttggaaggatgacctg
aactctggacatactttggtaacattattcgaattgcttggtgaaggcattctctccttc
attccatctcctgagatgtctctgtttttataa
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