Hibiscus syriacus (Rose-of-Sharon): 120161883
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Entry
120161883 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: crossover junction endonuclease MUS81-like
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
hsyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120161883
03460 Fanconi anemia pathway
120161883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120161883
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120161883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
DUF6429
Phi-29_GP16_7
Motif
Other DBs
NCBI-GeneID:
120161883
NCBI-ProteinID:
XP_039028025
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MEKNRRVMCPDNEELANYLLQKRQELADKPKGIKENTNMTVSKAYNNICNAQHPIKTLKD
LSDIKGVGKWILVLLRGYFDGGSGSSEPEELTRKGTVKKTKGNKRYLPQKNSVAYALLIT
LYRETVDGNEFMHKQDLIDATEASGLSRAPIMLEKGKGKPSQFGSSPRDWYSGWTCMSTL
IKKGFVVKSSCPAKYMLTPEGKEAARECLMKSKMEDPLENLVDVERLSQPDTQNASVQKL
CDLCTEETTEKADFHRKKSIDVPLDCLERCTRMGYSKEQVLSAFVEVSETSKKKEISSLL
PAVLCRLREDQVYGQEACDGVRSTRIQLSKDGGDRLNLCTLTLRACSSSRPSSNDLKADM
NVLSIPPLSFGEKFEDVYEVILILDDREQFTNQGARSKKMLEKICTEFKIKINVRRLPIG
DGIXIARHKHLSNEYVLDFVVERKNVNDLRSSIRDNRYRDQKLKLLRSGLKKLIYLVEGD
PNSSEAAESIKTACFTTEILEGFDVQRTSGLHDTLRKYAYLTRAITQYYKQHMPEDDSRL
NGVCPSFSEFIRRCQELDKVTVSDVFSIQLMQVSQVTEEVAIAVVDLYPTLVSLAHAYSL
LEGDVCAQEEMLRKQSNNVVSSVASKNISRFVWG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaataggcgagtaatgtgtcctgataatgaggaactagctaattacttgttg
caaaagaggcaagagctggccgataaacccaaggggataaaagaaaacactaacatgact
gtttcaaaggcatacaacaacatttgcaacgctcagcatcccatcaagacactcaaagat
ctcagtgacatcaaaggtgttgggaaatggattttggtgcttttgcgtggctattttgac
ggtggttcaggaagttcagaaccagaagaattaactagaaagggtacggtaaaaaaaact
aaaggaaacaaacgttatttgccccaaaagaattcagtggcatatgcattattgattact
ctatacagggagaccgtagatgggaatgaatttatgcataagcaggatcttattgatgca
actgaagcaagtggactctcacgggcgcctattatgctggagaaaggaaaagggaaacct
agccaatttggaagttctccaagggactggtatagtggatggacctgcatgtctacattg
ataaaaaagggatttgttgtgaaatcaagttgtccggcgaaatatatgctgacaccagaa
ggcaaggaagcagcacgtgaatgtctaatgaaatctaaaatggaagatcccttagaaaat
ttggttgatgtggaaaggctttctcaaccagacacacaaaatgcatctgttcagaagtta
tgcgatttgtgtacagaagagacaactgaaaaggctgattttcatcggaaaaaatccatt
gatgttcctcttgattgtcttgaaaggtgtactcgcatggggtactcgaaggaacaagtt
ctttctgcttttgttgaagtctctgaaacttcgaagaagaaggagatttcatcacttttg
ccagcagtcttgtgtcgtcttcgtgaagatcaagtttatgggcaagaagcttgtgatgga
gtgcgaagcactaggattcaattaagtaaagatggtggagataggctgaacttgtgtacc
ttgaccttgagggcctgttcttcctctaggccaagttcaaatgatctaaaagcagatatg
aatgtcttaagtattccacctctgagctttggggagaagtttgaggatgtgtatgaagta
attctaatattagatgatcgagagcaatttaccaatcaaggtgcacggtccaaaaaaatg
ttggagaagatttgcacggaattcaaaatcaaaataaatgttagaaggttgcctatagga
gatggaatctagatagctcgccataaacatctctccaatgaatatgttctagactttgtt
gttgagaggaagaatgttaatgatttacgctcttcgatacgggacaatcgttacagggat
cagaaactaaagcttctgagatctggacttaaaaagttgatatatcttgtggaaggtgac
ccaaattcttcagaagctgctgaaagcatcaaaactgcgtgcttcacaacagagattcta
gaggggtttgatgttcagagaacaagcggtttacatgataccctgaggaagtatgcttat
cttactcgagcaataactcaatattacaaacagcacatgcctgaggatgattctagattg
aatggggtctgtccctcctttagtgaatttatccgaaggtgccaagagctggataaagtg
acagtcagtgatgtattttccattcaacttatgcaggtgtcacaggtaactgaggaagtt
gccatagctgttgtcgatttgtatccaacattagtgtctcttgcacatgcttactctctt
cttgagggtgatgtctgtgcacaagaagagatgcttaggaagcagagtaacaacgtggtg
agctcagttgctagtaagaatatttctcggtttgtttggggttga
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