Hibiscus syriacus (Rose-of-Sharon): 120162020
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Entry
120162020 CDS
T09559
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120162020
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsyr01009
]
120162020
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120162020
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120162020
03041 Spliceosome [BR:
hsyr03041
]
120162020
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120162020
Protein phosphatases and associated proteins [BR:
hsyr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
120162020
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120162020
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120162020
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120162020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
120162020
NCBI-ProteinID:
XP_039028143
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MATATQGQTTTMDTALLDDIIRRLTEVRLARPGKQVQLSENEIKQLCVAAKDIFLQQPNL
LELEAPIKICGDIHGQFSDLLRLFEYGGFPPHANYLFLGDYVDRGKQSLETICLLLAYKI
KYPENFFILRGNHECASINRIYGFYDECKRRFNVRLWKSFTDCFNCLPVAALIDDKILCM
HGGLSPDLTNLDEIRHLYRPTAIPDTGLLCDLLWSDPDRDVRGWGMNDRGVSFTFGADKV
AEFLEKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCS
FQILKPAEKKAKLMSTKI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgacacaagggcaaacgacgacgatggacaccgcgttgttagatgatata
atcagacggctgacggaagtcagattagccaggccaggaaaacaggtgcaactttctgag
aatgagatcaaacaactttgtgttgctgccaaagatatcttccttcaacagcccaatttg
cttgaactcgaagcccccatcaaaatatgcggtgacatacatgggcaatttagtgatttg
ttgaggctattcgagtatgggggttttccacctcatgcgaattatctattcctaggcgac
tatgtggatcgtggcaagcagagtttggaaacgatatgtctcctacttgcttataagatt
aagtatccagagaactttttcatattgcgaggaaaccatgaatgtgcatctattaatcgg
atatacggattttatgatgaatgcaagcgtcgatttaatgtgagactttggaaaagcttt
actgattgttttaactgccttcctgttgcggctcttatagatgacaaaatattgtgtatg
catggtggtctttccccggacttgacgaacctagatgaaatcagacacttatatcgtcct
acagccattcctgacactggcttgctgtgtgatttgctctggtctgatcctgatagagat
gttagaggatggggaatgaatgacagaggagtttctttcacttttggggcagacaaagtg
gcagaattcttagagaaacatgatttagatcttgtctgtcgtgcgcaccaggttgtagag
gatggttatgaattctttgccgataggcaacttgttacaatattttcagcacctaactac
tgtggtgaatttgataatgctggtgcaatgatgagtgtcgatgaaaacttgatgtgttct
ttccagattctcaagccagctgagaaaaaagcaaagctcatgtccactaaaatatga
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