Hibiscus syriacus (Rose-of-Sharon): 120162067
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Entry
120162067 CDS
T09559
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120162067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120162067
Spliceosome [BR:
hsyr03041
]
Common components
Common spliceosomal components
SR proteins
120162067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
120162067
NCBI-ProteinID:
XP_039028177
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MPRYDDRRGGTRLYVGHLSSRTRSRDLDDMFSRYGSVRDVDMKRDYAFVEFSDPRDADDA
RHALDGRDIDGSRIVVEFARGVPRGPGGSRDNPGRSGPTPGSGRCFNCGIDGHWARDCKD
GDWKNKCYRCGERGHVERNCQHSPKKLSRRERSYSRSPSPYHGRSRSCSYSRGRNDSRSR
SPVKRDRSYEREDRRLRSPRHHRGSPSPSGRRKHSPAPVGRRPQERGSLSPRDRRQTNGS
DYSPSPRGRSRSPEAEADAVDRAHRNSTKENGQNGSPCHPPRDDRSPIYDDEDNHASARR
SESN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtatgatgaccgtcgtggcggcactcgtttgtatgtcggccatttgtcttcg
agaacaagatcacgcgaccttgatgacatgtttagcagatacgggagtgtacgagatgtg
gatatgaagcgtgactatgcattcgttgaattcagtgacccaagagatgccgatgatgca
agacatgcattggatggtcgagacatagatggaagccgaattgttgttgaatttgccagg
ggagtgccacgtggtccaggtggatctcgagataaccctggaagaagtggtcccactcct
ggatctggacgttgcttcaactgtggaattgatggtcattgggctcgtgattgcaaagat
ggggattggaaaaataagtgttaccgctgtggggaacgaggccatgtcgaaagaaattgt
caacacagtccaaagaaactaagccgcagagaacgtagttactcacgttctcctagcccc
taccatggtagaagcagaagctgcagttacagcaggggacgcaacgacagtagatcaaga
tcacctgttaagagagaccgaagttacgaacgtgaagatagaaggttaaggagccctagg
caccacaggggttctccttccccatctggaaggaggaagcatagtccggcacctgtggga
agaaggccacaagagagaggtagcctttccccaagagatcgccgtcaaactaatggttca
gattacagtccaagtcctagaggaaggagcagaagccctgaagctgaagcggatgccgtg
gacagggctcataggaactccacaaaggaaaatggtcagaacggcagcccttgtcatccg
ccaagggatgatcgaagccctatttatgatgatgaggataatcatgcttccgctagacgc
agtgaatcaaattag
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