Hibiscus syriacus (Rose-of-Sharon): 120162082
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Entry
120162082 CDS
T09559
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120162082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120162082
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120162082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120162082
NCBI-ProteinID:
XP_039028194
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MCCLISLSSNEQNSRWLAKNLASPIIDPITNGTRKMLNPSLPVASRTRSRTEAHVLEDHR
AFKRRKVVEEERKDKTSTSFASKKVTSEVHFLYQKSGVEIQQRKQDARSAADICSPYNDD
DEEKYDYDDDSMEGSDEDLTSTSGEDNDESDDLDYCGKEEERGKEEEKKKNSRCSSVSDD
DDDIVCLNDFTSSYTKPSKGRKGKAASEKLHLLTVLADTILNNEETENNLLPLNFTSGVE
DTITSQDVEFEDGLVSLWTEMQFCLVSSEIGSTNPSLVETEDATNVSEVKRDRSSLCRQG
DHELVLDEEIGRKCKFCSFLELEIKYITSPFMKRPCGKYERQHSGIVNSSVFDGLQDLDP
SIDMPGDSSANIEGTVWEIVPNRESKLHPHQREGFEFMWSNIAGGIYRDKSKNSCSGGGG
CIISHAPGTGKTLLTIVFLQTYLKEYPSSWPVIVAPCTMLLTWRDEFIKWKVDIPFHNLN
SEDFSDKEETYAIPLYEKLNNGTPHADKHAKRVVKLLSWKSSGGVLGISYSLFTKLAGKR
KGGKGKCKNLDDQISKILLDLPRLFVFDEGHIPRNADSLLWKSLSRIKTERRIILSGTPF
QNNFKELFNTLWLVRPTFAEGIRYTNRYKVNTRRGRKGDQAKLKFAYWIGSIENDVDRNE
KLREVRAVIKPFVHVYKGTILQTALPGLKHSLVVLWPTDLQKKILHRVEEILHRVEEILQ
RAREKNPFKKRRIKEKQNPLDLDRYVSLISIHPSLLKQLLIPLLDEKDSNEVVSSIVSMK
ELERIRLKPDEGVKTKFLMNLLKLSEALEEKVIVFSQYIGPLRLIMDQLQDNLKWKEGVE
ILFMHGQCDIKQRQCSINVFNDPKSKVRVLLASTKACSEGINLVGGSRLVLLDVTWNPSV
ERQAISRAYRLGQKKVVYIYHLISSWPMEASKYYRQAGKDRLSELLFSSDKGDHHKQVCN
IVEDKVLEEMFRLETVKSMFEKIINEPKDSEFVAFEDQ
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcttgatttctttgtcgtccaacgaacaaaattcaaggtggttggccaagaat
ttagcatctccgatcatcgacccaatcaccaatggtacacgcaagatgttgaatccgtcg
ttgccggtagcttcaagaaccagaagcaggacggaagcccacgtcttggaggatcatcgt
gcattcaagcggaggaaggtggtggaggaggagcggaaggacaaaactagtacatctttc
gcttctaaaaaagtgaccagtgaagtccattttctgtaccaaaaatctggcgttgaaata
cagcagcgtaaacaggatgcaagaagcgctgctgatatttgcagtccttataatgacgat
gatgaagaaaaatatgattatgatgatgattcgatggagggttctgatgaggatctaacc
tccacaagcggagaagacaatgatgagtcggatgatttggattattgcgggaaggaggag
gagagagggaaggaggaggagaagaagaagaatagtcggtgttcttctgtctcggacgac
gacgacgacattgtttgtttaaatgattttacttcttcctataccaagccgtctaagggt
agaaaagggaaggcggcctccgagaaacttcaccttcttaccgttttggcagatactatt
ttgaacaatgaagaaactgagaacaaccttttgcctctcaatttcacttctggggttgag
gacacaatcacttctcaggatgtagaatttgaagacggattagtctcactgtggactgag
atgcagttttgccttgtttctagcgagattggttcaactaatccttccctggtggaaact
gaggatgctactaatgtttctgaggttaaacgggacagatcatccctatgtcgtcaaggg
gatcatgagcttgtgctagacgaagaaattggaaggaaatgcaaattttgctcttttttg
gaactggaaataaagtacattacatcaccttttatgaaacgtccatgcggaaaatacgag
aggcaacactctggcattgtgaactcctctgtgtttgatggccttcaagatctagaccct
agcattgacatgcctggtgattcctctgccaatattgaaggaacagtatgggaaatcgtt
ccaaatagagaaagtaaactccacccccatcaacgtgaaggttttgaatttatgtggagt
aatatagcaggggggatatatcgtgataagtctaaaaactcatgcagtggcggtggagga
tgcatcatatctcatgctcctgggacagggaaaactcttctgactatcgtctttcttcag
acatacttaaaagagtatccaagctcatggccagtgattgttgctccttgtactatgttg
ctaacatggagagacgagttcattaagtggaaggttgatattccctttcacaatctgaac
agtgaggatttttctgacaaggaagaaacatatgcaattcctctttatgagaaactaaat
aatggtaccccgcatgcagataaacatgctaagcgtgtggtgaaactgctttcctggaaa
tccagtggaggcgtcttgggaattagttacagccttttcactaaacttgctggaaaaagg
aaaggagggaaaggaaaatgtaaaaatttagatgatcaaattagtaaaatccttcttgat
cttcctaggctttttgtctttgatgaaggacatataccgagaaatgctgattctcttttg
tggaagtctttgtcaagaattaaaactgaacgtcgtataattttgtccggaactcccttc
caaaacaatttcaaagagctcttcaacacgctctggttagttagaccaacatttgctgaa
ggaatccggtatactaatcgatacaaggttaatacaaggcgtgggcgcaaaggagaccaa
gcaaaattgaaatttgcctattggattggttctatagaaaacgatgttgatagaaatgaa
aaactaagggaggttagagctgtgattaagccttttgttcatgtgtataaaggcacaatt
ctacagactgcacttcctggtttgaagcattctctagttgttttatggcccactgatctg
cagaagaaaatcctacatcgtgttgaagaaatcctgcatcgtgttgaagaaatccttcag
cgtgctagagaaaagaaccctttcaaaaagagaagaataaaagaaaaacaaaatccactt
gatttggatcgatatgtgtccttgatctccatccatccctctttgttgaagcagcttttg
attccgctgttagatgagaaagatagtaatgaagttgtcagctccattgttagcatgaag
gagttagaaaggataagactgaaacctgatgaaggagtgaaaacaaaattcctcatgaat
ctgcttaagcttagtgaagccctggaggaaaaggttatagttttcagccaatacattgga
cctttacgcttaataatggaccagcttcaagataatttaaaatggaaggaaggtgtggag
atactgttcatgcacggacaatgtgacattaagcagcgtcaatgctcgattaatgttttt
aatgatccaaagagcaaagtaagggtgttgcttgcatcaacaaaggcttgctctgaaggt
attaatcttgttggaggttcaaggctggtattacttgatgtgacttggaacccatccgtc
gaacgacaggctatatcccgtgcttataggcttggccagaaaaaggttgtatacatatac
caccttatctcctcctggccaatggaggcatcgaaatattatagacaagctgggaaggat
cggttatctgagttattgttctcttcagataaaggtgatcatcacaaacaagtctgtaat
attgtagaggataaagttttggaagaaatgttccggcttgagacggttaagtcaatgttt
gaaaagatcataaacgagcccaaggattctgaatttgttgcttttgaggatcaataa
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