Hibiscus syriacus (Rose-of-Sharon): 120162548
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Entry
120162548 CDS
T09559
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
hsyr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120162548
03083 Polycomb repressive complex
120162548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120162548
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120162548
Histone modification proteins
HAT complexes
HATB complex
120162548
HDAC complexes
Sin3A-HDAC complex
120162548
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120162548
PRC2.2
120162548
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120162548
Heterochromatin formation proteins
Other heterochromatin formation proteins
120162548
Chromatin remodeling factors
NuRD complex
120162548
NuRF complex
120162548
NuRF complex (fruit fly)
120162548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
120162548
NCBI-ProteinID:
XP_039028620
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLTNEEYKIWKKNTSFLYDLVITHALEWPSLTVEWLPDRDEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLQDSENDARQYDHDRSDLGGFGCTSGKVQIIQ
QINHEGEVNRARYMPQNPFIIATKTVSAEVFVFDYSKHPSKPPLVGACSPDLRLMGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDSHKEEVFQVGWNPKNETTFASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENVYHDEDDVPGDES
AKCS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggatgaggaggagatgcgtggcgagatcgaggagaggctgacaaatgaagag
tacaaaatttggaaaaagaacacttctttcctctacgatcttgtcattacccacgcactc
gagtggccctctctcaccgtcgaatggctccccgaccgcgacgagccacctggaaaggat
tactccgttcagaagatgatcttgggcacccacacctccgaaaacgagcccaattacctc
atgttggctcaggtccagcttcccctccaggattccgagaacgatgctcgccaatacgac
cacgaccgctctgacctcggcggtttcggatgcaccagcggcaaggtccagattattcag
cagattaatcacgaaggggaggtcaatagggctcgttatatgcctcagaatcctttcatt
atagccactaagacggtcagtgccgaggtttttgtgttcgattacagtaaacatccttcg
aagccgcctttggttggggcttgcagtcccgatttgagacttatgggccatagcacggag
ggatatgggctatcttggagtaagttcaagcaaggccatttgcttagtggttcagatgat
gctcagatttgtttatgggatatcaatgccactcccaagaacaaggctcttgatgctatg
cagatcttcaaggtccacgagggtgtcgttgaagatgttgcttggcatctcaggcacgag
tacttgtttggttccgttggggatgaccaatacttgcttatttgggacctgcgaacccca
tctgtcaccaagcctatccagtccgtagttgctcaccagagtgaggtcaactgcttagct
ttcaatccatttaatgagtgggttgtggcaacgggttctactgataagacagttaagtta
tttgatcttcgcaagatcagtactgcactccacacctttgatagccacaaggaagaagtt
ttccaagttgggtggaatccaaagaatgaaacaacctttgcatcctgttgtcttggtaga
aggctcatggtttgggatcttagcaggattgatgaagaacagacaccagaggatgccgaa
gatggtccacccgagttgctcttcattcatgggggtcacactagtaaaatatctgatttt
tcatggaacccgtgcgaagattgggttattgctagtgtagctgaagataacatccttcaa
atatggcagatggcagagaatgtttaccacgatgaggacgatgtaccgggagatgaatca
gccaaatgttcttaa
DBGET
integrated database retrieval system
