KEGG   Hibiscus syriacus (Rose-of-Sharon): 120163255
Entry
120163255         CDS       T09559                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120163255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120163255
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     120163255
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 DUF3337 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR75_2nd RAWUL WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_Aladin Beta-prop_ACSF4 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 120163255
NCBI-ProteinID: XP_039029162
LinkDB
Position
Unknown
AA seq 752 aa
MHRVGSVGNNTNSNRLRKEKRLTYVLNDSADTKHCAGINCLALLKSSTYDGFDYLFTGSR
DGTLKRWALGENTATCSATFESHVDWVNDTVIAGDSTLVSCSSDTTLKTWNCLSYGTSTR
TFRQHSDYVTCLANAEKNANVVASGGLGGEVFVWDIEAAITPVSKSSDVVENDCSNGING
SKNSLQMSSLRTIGSSNGIGTHTTQCHGYVPIAAKGHKESVYALAMNHNGSLLVSGGTEK
VVRVWDPRTGSKNMKLRGHTDNIRALLMDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDLSLYLTDLSTRESLLLCIKEQPILQLALHDDNIWVAT
TDSSVSRWPAEGRNPQNVFQRGGSFLAGNLSFSRARVSLEGSTPASAYKEPNFNIPGTPA
IVQHEILNNRRHVLTKDAAGSVKLWEITRGVAIEDYGQVSFDEKKEELFEMVIIPAWFTV
DTRLGSLSVHLDTPQCFTAEMYSADLNISGKPEDDKVHLVRETLKGLLAHWLSKRRQRHC
SQASANGDVLSGKDMAAGGAAHSKIEVDGKAENDSTVYPPFDFSTVSPPSIITEGSQGGP
WRKKITELDATEDEEFPSWVLDCILNNRLPPRENAKCSFYLHPCDGSSVQILTQGKLSAP
RILRMDKVVNYVIEKLVLDKPIDSVNIDGTYAPGLGGQSQSGSKPWQKLRPSIEILCNNQ
VLSPDMSLATVRAYIWKKPKDLVLNYRVIQSK
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggcagtgtgggaaacaataccaattctaaccgcctacgtaaagaaaag
aggctgacatatgtattgaatgacagcgctgacacaaagcattgtgctggcataaattgt
ttggcattgctaaagtcatctacctatgatgggttcgattatcttttcactggaagccgt
gatggcacacttaagagatgggcacttggtgaaaacactgccacatgttctgctacgttt
gagtctcatgttgattgggttaatgatactgttattgctggtgacagcacacttgtttcc
tgctcgtcagacactacattaaagacgtggaattgcttgtcttatggaactagcaccagg
acatttcgtcaacactctgactatgttacatgtctagccaacgctgaaaaaaatgccaat
gtagttgcctctggtggtcttggtggggaggtttttgtgtgggatattgaagctgcaatt
actccagtgtctaagtccagtgatgtagtggaaaatgattgttccaatggtataaatggt
tcgaaaaattcattacaaatgtcaagtttgcgaacaattggctctagtaatggcattgga
acacacacaacccagtgtcatggatatgtccctattgccgctaaagggcataaagagtct
gtttatgcattggcaatgaatcataatggatcccttcttgtctctggtggaactgagaag
gttgtgcgagtttgggatccaagaactggttcaaagaatatgaaactaagagggcataca
gataacattagggcgttgcttatggattctactggcagatattgtttgtcagggtcctct
gattctatgatcaggctttgggacctcggtcagcaacgttgtgtgcattcatatgctgtg
cacacagattctgtttgggcacttgcaagcaccccaacatttagtcatgtttatagtggt
ggtagagatctttctttatatttgacagacctgtcaacaagagagagtcttttgctttgc
ataaaggaacaaccaattttgcagttggcattacatgatgataatatatgggttgcaact
acagattcttcagtttcaaggtggcctgccgaaggacgaaatcctcagaatgtcttccaa
agaggtggttcattcttggctgggaacttgtctttttctagggcaagagtttcattagaa
gggtctaccccagcctctgcttacaaagaaccaaactttaacattcctggaactccagca
attgttcagcatgaaattttaaataacagaaggcatgtattgacaaaggatgctgctggt
tcagtaaagctctgggagataaccagaggtgtcgcgattgaggactatggccaggtttca
tttgatgagaaaaaggaagagttgtttgagatggtaatcattcctgcatggttcactgtg
gatacccggcttggaagcttgtctgttcatttagacacaccccaatgctttactgcagag
atgtattctgcagatctgaacataagtggaaagcctgaggatgataaggttcatctagtt
cgtgaaacgctgaaaggtctgctggctcattggctgtccaaaagaaggcaaagacattgc
tctcaggcttcagctaatggagacgttttgtcaggaaaagatatggcagcaggaggtgct
gctcattcaaagatcgaggtagatggaaaggctgaaaatgactccacagtctatcctcct
tttgacttttctactgtttcccctccctcaattattacggagggttcccaaggaggtcct
tggagaaagaaaattactgaattggatgcaacagaggacgaggaatttccttcgtgggtt
ttggattgcatattaaataatcgtttaccaccacgagaaaatgccaagtgcagcttctat
cttcatccatgcgatggttcatctgttcagattttgacacaaggaaagttaagtgcacct
cgcatattgagaatggataaggttgttaattatgtcatagaaaagctggtgcttgacaaa
ccaattgatagtgtaaatatcgatgggacatatgctcctggacttggaggacaatcgcag
tctggatcgaagccttggcaaaagcttcggccttctattgagattttatgcaataaccag
gtattatctccggacatgagcttagccactgtgcgggcttacatatggaagaaacccaag
gacttggtacttaattatagagtgattcaaagcaagtga

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