Hibiscus syriacus (Rose-of-Sharon): 120163441
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Entry
120163441 CDS
T09559
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120163441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120163441
Membrane trafficking [BR:
hsyr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120163441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
120163441
NCBI-ProteinID:
XP_039029308
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MGTENPGGPNFPMRPPSTPFASAPPTMAPFASSGSVVGSEASNFRPTPPSGPPTMTPFSL
AGPRLPARLSNPSVPSPPITSVPPVGGPYQQFPASPFPSTFQTTPIRTPPEGQPPFQHFA
SQVSAPSVSLPPPSEVPLVPMGSSPQPPSGSLFSGPRPNFQPPFPGYPSQQPAVSQAPFP
VQQGSFMPPPPAVATPLSYQSRDQMQHPSSAPPIGGIQSLAEDFSSISLAPMHGSIEPRL
DYRTLPRPLDGDVEPSSFTEMYPMNCNPRYLRLTTSAIPFSKYLVSKWHLPLGAVVCPLA
EAPEGEEVPVINFTSTGIIRCRRCRTYVNPYVTFTDAGRKWRCNYCALLNDVPGDYFAHL
DATGRRIDLDQRPELLKGSVDFVAPTDYMHRPPMPPSYFFLIDVSVSAVRSGMIEVVAQT
IRSCLDELPGFPRTQIGFITFDSTIHFYNMKSSLAQPQMMVVADLDDIFVPLPDDILVNL
SESRNVVETFLDSLPSMFQDNVNVESAFGPAVKAAFMIMSQLGGKLLIFQNTLPSLGVGR
LKLRGDDLRVYGTDKEHILRLPEDPFYKQMAADLTKYQIGVNVYAFSDKYTDIASLGILA
KYTGGQVYYYLNFQSGIHGEKLRHELARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLK
STDLIALPTLDCDKAYAVQLSFEETVLTTQTVYFQVALLYTASCGERRIRVHTAAAPVVT
DLGEMYRQADTGAIVSLSSRLAIEKTLTNKLEDARNSLQLRIVKALREYRNLYAVKHRLG
ERMIYPESLKFLCLYGLALSKSVPLKGGYADAQLDERCAAGFTMMALPVKKLLKLLYPNL
IRIDEYLLKPFAQSDDFKITMKRLPLVAESIDSRGLYLYDDGFRFVIWFGRMLSPDIARN
LLGADFAAELSKVTFSEHDNEMSIRLMRILKKLGEGDPSYYRLPYLVRQGEQPNEGLLLP
VNLLEDQMGGASGYVDWIMQIHRQVQQKA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaaaaccccggtggtccgaattttccgatgagacctccttctacccctttt
gcttctgctcctccaactatggcacctttcgcatcatctggttctgtggtgggatcagaa
gccagcaattttagacctaccccaccaagtggtcccccaactatgacgcctttctcatta
gctggacctagactgcctgctcgtttaagcaatccatcagttccatctccacccattaca
tctgttccaccggttgggggaccttatcagcaatttccagcatcgccatttccttcaact
tttcaaactacccctattcgtacaccacctgaggggcagccaccatttcaacattttgca
agtcaagtatcagccccgtccgtttctctccctccaccatcagaagtaccactagtgcca
atgggatcttcaccacaacctccatcgggttcattgttttcagggcctagacccaatttt
cagccaccttttcctggatatccaagccagcagcctgcagtttcacaagcaccttttcct
gttcagcaaggaagttttatgcctcctccaccagcagtagcaactcccttgagctaccag
tcaagggaccaaatgcaacatcctagctctgcgcctcctattggtggtatccaaagcttg
gcagaagattttagttcaatctctcttgcacctatgcacggatcaattgagcctagactc
gattatagaacacttcctaggccgttggatggtgatgtggagccaagttcttttactgag
atgtatcctatgaattgcaatcctagatacctacggcttactacaagtgctataccattt
tccaagtatttagtttcaaaatggcatttgcctcttggagctgttgtttgtcctcttgca
gaggctcctgaaggggaggaagtgccggttattaatttcacttcaaccggtattattcgc
tgcagaagatgtcgcacatatgtgaatccctatgtcacttttacagatgccggaagaaag
tggcgctgcaattactgtgctttactaaatgatgttcctggcgactattttgcccacttg
gatgccactggcagaagaattgatttggatcagcggcctgagcttctaaaaggcagtgtg
gatttcgttgcaccaactgattacatgcaccggccaccaatgccgccatcatattttttt
ctcattgatgtttcagtatctgcagtaagaagtggcatgattgaggttgttgctcaaact
atccgttcgtgtttggatgagctgcctggattccccagaacacagattggttttattact
tttgacagcacaattcatttttacaacatgaagtcatctcttgcacaacctcaaatgatg
gtagttgcagacctggatgatatatttgtcccattgccagatgatatccttgtcaactta
tctgaatcaagaaatgtggttgaaacattcctggatagcttgccgtctatgtttcaggac
aatgtgaatgtggaatctgcttttggtcccgcagttaaggcagcattcatgattatgagt
caacttggaggaaagttgctaattttccagaacacgttgccttccctgggagttggacgc
ttgaagttgcgtggagatgatcttcgtgtgtatggaactgataaggaacatatattgcga
ttacctgaagatcccttctacaagcaaatggcggctgatctcacaaaatatcagataggg
gttaatgtttatgcttttagtgacaaatacactgacatagcttccttaggaatcctggcg
aagtatactggaggtcaagtatattattatctaaacttccaatcaggtattcatggtgag
aagttgaggcatgaattagccagagatcttactagggagacagcctgggaagcagttatg
cgcataagatgtggaaaaggaattcgattttcttcctatcatgggaactttatgctgaag
tccacagatttaatagctcttccgactttagattgtgataaagcatatgcagtgcagcta
tcctttgaggagacagtgctgacaactcagacagtatatttccaagttgctttactatat
actgcatcctgtggagagaggcgtattagagtacatacggcagctgcccctgttgttaca
gatctaggggagatgtaccgacaggctgacactggtgccattgtttctttgtcttctaga
ttagcaatcgagaaaactttgaccaataaacttgaagatgctagaaattctttgcaacta
aggattgtaaaagcactccgagagtaccgcaatctctatgctgtgaagcatcgcttggga
gagaggatgatttatccagaatctctgaagtttttatgtctgtatggattagcactctct
aaatcagtacctctaaaaggaggatatgctgatgctcaactcgatgaacgttgtgcagca
ggtttcaccatgatggcattacctgttaaaaagttgttgaagcttttataccctaacttg
attcgaatcgatgagtatcttttgaagccatttgctcaatctgatgatttcaaaatcact
atgaagagattgcctttggttgccgaaagcatagattcacgaggcctatatttatacgat
gatggcttccgatttgttatatggtttggtagaatgctttcgcctgatatagctaggaat
ttactgggggcagattttgcagcagaattatcgaaggttacctttagtgagcatgataat
gaaatgtcaataaggctgatgaggatattgaagaaactaggagagggtgacccttcatac
tatcgacttccttatctcgtaagacaaggcgagcaacccaatgaaggtttgctgcttcct
gtaaatcttctcgaggaccaaatgggtggtgccagtggttacgttgattggataatgcaa
atacaccggcaagtccagcaaaaagcatga
DBGET
integrated database retrieval system
