Hibiscus syriacus (Rose-of-Sharon): 120163524
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Entry
120163524 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120163524
Membrane trafficking [BR:
hsyr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120163524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
120163524
NCBI-ProteinID:
XP_039029374
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MASNPPFQVEDQTDEDFFDKLVNDDDDDSMDPTVPIFTEGNNSNDAKAFSNLLMGEDSGC
KEVDCHGGKEKDPADAGPAPANSSAGNGPNNSLGIDNSLIDSNNHIQEGAQSEAVFSQNL
NENIGSKNAGVKEVGWNSLFAASNENGVQGFGSYSEFFSNLGENSTEDFPSEVDVIAKTN
LFDRNSVTAQEQYHDANHDQVCGDSIADNGNELDFYSIQYWENMYPGWKYDANSGQWYQM
DVSSGDGSGNPDMKAGASYLQQTFQSVAGTMTIVERSAMDSVANWNQVSKVNDGYPEHMV
FDPQYPGWYYDLIAQQWCPLDSYNASVKSTVQADGQQNGYTYTVQNSLTQINGSRMHGEN
EQGDNYGSVGLKNLGERPIWGDSYGNYDSPGLNMWQSGTVPKTKAVSSIAGNQQPDTSFG
LNMPVNNQVNHFKSSYNSLPEVQSVYNANQVHTEANGVSGLQSFLPTENFNHQFTQTSLE
KNEQMHFSNDFYGGQKSVNVAQQPLQTSQMFPYASNTGLSSAGRXPHALVSFGFGGKLIV
MKDSSPLQNSSFGAQGSVGASISVLNLLEVVNSNISISGAAPATSDYFSTLCQQSFPGPL
VGGNVGSKDLNKWIDDRIACCESPNMDYGKGELLRMLLSLLKIAWQHYGKLRSPFGSDIL
LKETGTPESAVAKLFASAKRKDTPYGALSHCLKQLPSERQVRATALEVQNLLVSGRKREA
LQHALEGQLWGPALVLASQLGEQFYIDTVRQMALDQLVAGSPLRTLCLLIAGQPAEVFST
GPTVSMDLSQQHAELRENCMLDDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITAA
HICYLVAEANFESYSGSARLCLIGADHLKFPRTYASPEAIQRTELYEYSKVLGNSQFVLL
PFQPYKLVYAHMLAEVGKFSDSLKYCQAVLKSLKTSRLPEVETWKHLILSLEERIRSHRQ
GGYATNLAPAKLVGKLLNFFDSTAHRVVGDLPPPSTPAPNGNSLGNDHFNQQTGPRVSSS
QSTMAMSSLMPSSSMERIRDWAGKGADGKMTVHNRSVSEPDMSRTPRQVDSSKETGTSTE
QGKASGSVGASRFSRFSFGSQILQKTVGLVLGPRADKQAKLGERNKFYYDEKLKRWVEEG
AEPPAEETALPPPPTTVAFQNGTSDYNLNSVLKNEGSPPNGSPKLRNPTPIEHASGIPPI
PTSSNQLSARGRMGVRARYVDTFNKGGGGGQANLFQSPAVSSVKPAAAANAKFFVPIPVS
TTTNEQSMETTTGNAKENATSNNLTTSTSDADANASCPSSKTKHKFPSIDNIPQEGIMTN
GNGYSSDWRRAASWSGSNFELGHPSGADIRLSGEALGEPPPLFMPSPMNDNIGDELQEVE
L
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccgttccaggtggaggatcaaacggatgaagatttcttcgacaag
ttagttaatgatgacgatgacgatagcatggaccccaccgtcccaatattcacagagggt
aataactccaacgatgctaaagccttttccaatttattaatgggagaagattccggctgc
aaagaggttgactgtcatggcggaaaggaaaaagatcccgctgatgcaggtccagcaccc
gccaattcatcggcaggtaatggccctaataattcattagggatagataatagtttgatt
gattcgaataatcacatacaagaaggagcacagtcagaggctgtattcagtcagaactta
aatgaaaatattggatctaagaacgctggggttaaggaagtagggtggaattcgcttttt
gccgcttctaatgagaatggggtccaagggtttggttcgtactctgagtttttcagcaat
ttaggggagaattccacagaggatttcccttctgaggtggatgtaattgcgaaaacaaat
ttatttgatcggaattcagttactgctcaggagcagtatcatgatgccaaccatgatcag
gtttgtggagattctattgcagataatggaaatgagcttgatttctatagcattcagtac
tgggagaatatgtatccaggatggaagtatgatgcaaattcagggcagtggtatcaaatg
gatgtttcaagtggtgatggaagtgggaacccagatatgaaagcaggggcttcttatttg
cagcagacatttcaatctgttgctgggactatgacaatcgtagagagaagtgccatggat
agtgtggcaaattggaatcaggtttccaaagtgaatgatgggtatccagaacatatggtt
tttgaccctcaataccctggttggtactatgacttaattgctcagcaatggtgtccactg
gatagctataatgcctctgttaagtcaactgttcaagctgatggtcagcaaaatggatat
acttataccgttcagaattctctgacacaaattaacggttctaggatgcatggtgaaaat
gaacaaggtgataattatgggtcagtaggtctcaaaaaccttggtgaacgtcctatttgg
ggagattcctatggtaactatgatagtccaggtttgaatatgtggcaatctgggactgtt
cccaaaactaaggcagtttcaagcattgctgggaaccagcaaccagatacatcttttggt
ttgaatatgcctgtgaacaaccaagtaaatcacttcaagtcatcctataattctcttccg
gaagttcagtcagtatataatgctaatcaggttcatactgaagccaatggggtttctggg
ttacaaagctttcttcctactgaaaacttcaatcaccagtttacccagacaagtttagag
aaaaatgagcaaatgcatttctcaaatgatttctatggaggccaaaagtctgttaatgtt
gctcagcagccacttcagactagccagatgtttccttatgcttctaacactggattgtct
tctgctggccgtnctccacatgcacttgttagttttggatttggtggaaaactcatagta
atgaaagatagtagtcctctgcaaaactcgtcatttggtgcccagggttctgtaggagca
tctatctctgtactcaatttgttggaagttgttaattcaaacattagcatttctggtgct
gcaccggcaacctctgattattttagtactctatgccaacaatccttccctggtccattg
gtgggtggaaatgtaggcagtaaagacttgaacaagtggattgatgacaggattgcctgc
tgtgaatcacctaacatggactatggaaaaggtgaacttttgagaatgcttctctcgttg
cttaaaatagcttggcagcattatggaaaacttcggtctccttttggatctgacatccta
ttgaaggagactggtactccagaatcagcagttgctaaactctttgcatctgcgaagagg
aaggacacaccttatggtgctcttagccactgcttgaagcaattgccttctgaaagacaa
gttcgggcaactgcacttgaggtgcagaatcttctggtttctggaagaaaaagagaggct
ctacagcatgcactagaaggtcaattgtggggacctgcacttgttctcgcatcgcaactt
ggcgaacagttctacattgatactgttaggcaaatggcacttgatcagctggtagcaggg
tctcctttacggacattatgcttgctaattgcagggcaaccagctgaagttttttccaca
ggccccacagttagcatggatttgtcgcaacagcatgcagagttaagggaaaattgcatg
cttgatgattgggaagagaatttggccgtaataactgcaaatagaaccaaagatgatgaa
cttgtaattattcatcttggagattgcctgtggaaggaaaggagtgagataacggcagca
cacatctgttacttagttgcggaagcaaactttgagtcatattcaggtagtgctagactt
tgtcttatcggagcagatcacttgaaatttccccgaacctatgctagtccagaggctatc
cagaggactgaattatatgaatattcaaaggtgctggggaactcccagtttgtcttgcta
ccatttcagccatacaaacttgtttatgcacacatgctggctgaagttggaaaattttca
gattcattgaagtactgtcaagctgtattgaaatctctgaaaactagtcgattgcctgag
gtagaaacttggaaacacttaattttatctcttgaggagaggataagatcccatcgacag
gggggatatgctacaaatttggctccagcaaaattagttggtaaattgctgaactttttt
gatagcactgcacatcgtgttgttggggatctaccaccaccttctacaccagcaccaaat
ggaaattctctaggtaatgatcatttcaaccaacaaactgggccaagagtctcttctagc
caatcaacaatggctatgtcatcattgatgccctcttcttcaatggaacgtataagagat
tgggcaggcaagggggctgatggcaaaatgacagtgcataatagaagtgtttcagagccg
gacatgagcagaactccaagacaggttgattcatccaaggaaacaggaacatccactgaa
caaggcaaagcatcaggctcagtaggggcatctcgcttttctcgttttagttttggctca
cagattttacagaaaactgtggggttagtcttagggcctcgtgctgataaacaggctaag
ctaggcgaaagaaacaaattctactatgacgaaaaacttaagagatgggtggaggaaggt
gctgaacctccagctgaagaaacagccttgccaccacctccgactactgttgcattccag
aatggaacgtctgactacaacttgaactctgtattgaagaatgagggttctcctcctaac
ggaagcccgaaactcagaaacccaaccccaatagaacatgcttctgggatccctcctatt
cctacaagctccaatcaattatctgctcgtggacgaatgggtgttcgagcaaggtatgtg
gacactttcaacaaaggtggcggcggcggccaagcaaatttatttcagtcaccggctgtt
tcctctgttaaacctgcagcagctgcaaatgcaaagttctttgttcccattcctgtatca
acaacgactaatgaacaatcaatggagacaactactggaaatgcaaaagagaatgctaca
agtaataatcttaccacttccacttctgatgccgatgccaacgcttcttgtccatcatcg
aagactaagcacaaattcccaagcatcgataatattcctcaggaaggcataatgacaaat
ggcaatggctattcatcagactggcgtcgagcagcctcgtggagcggaagcaactttgaa
ttaggtcatcctagcggggccgacataagactttcaggagaggcattgggggagcctccg
ccattgtttatgcctagtccaatgaatgataatattggggatgagctacaagaggtggag
ctttga
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integrated database retrieval system
