Hibiscus syriacus (Rose-of-Sharon): 120164911
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Entry
120164911 CDS
T09559
Name
(RefSeq) TATA-binding protein-associated factor BTAF1-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120164911
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120164911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
HEAT_GCN1
HEAT_EZ
HEAT_GCN1_C
HEAT_ECM29
CLASP_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
120164911
NCBI-ProteinID:
XP_039030471
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MNYFFYFKLSDLENDLDFCAVDSFTDDDSSDHDGGRWPFRSFVEQLILDMFDPVWEIRHG
SVMALREILTHHGASVGVYFPDLNSDDTLFLEIKDMDFSSKIKKEREIDLNMQVSPDELE
PDMKRPKLEDGSFPVMDKTITAGLHGGFDVAVKIEDTAWTLPSGQFNGQHDISSMKMETE
LYENDVICQSKEAEVEEQKSYYEDKAAFANSDVLKDLPENCKLRNLVKLTRHSWLKNCEF
LQDCAIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGATFKYMHPSLVHETLNVLLQMQ
RRPEWEIRHGSLLGIKYLVAVRREMLQDLLGYVVPACKAGLEDPDDDVRAVAADALIPAA
AAIVALKGQLLHSIIMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEDMMPKIIGTSTDKE
KQNFNLNEVIRADEVGEGKDLQENPYMLSMLAPRLWPFMRHSITSVRHSAIRTLERLLEA
GYKRSISEHSGNSFWPSFILGDTLRIVFQNLLLESNQEILQCSERVWRLLVQCPVGDLEV
AAASFMSSWIELATTTFGSTLDSTKMFWPVALPRKSHHRAAAKMKAVKLENESYGTIGVD
SMRVAVSQETNGDASANLVKIIVGADTEMSVTNTRVITASALGIFASKLQADSLQYIVGP
LWSALSSLSGVQRQVASVILISWFKEIKSKDSSGNQEIMHSFPDYLRKWLLDLLACSDPA
FPTKDSVLPYAELSRTYAKMRNEASQLLHAVESSGMFVDILSARKFDAQSASVDDAISFA
SKLPLLSNDNAGNESMGRNVDDIESTKQCLIATSGYLKCVQSNLHVTVTSLVAAAVVWMS
ELSARLNPIILPLMASIKKRTGTEEIMQQKAAEALAELIYHCIARKPSPNDKLIKNICSL
TYSDPFETPQAAIINSMEIIDDQDFLSFGTSLGKPKSKVHMLAGGEDRSRVEGFISRRGS
ELALRHLCEKFGPTIFEKLPKLWDCITEVLIPCSPSDNQQIVQAVESIKDPQILINNIQV
VRSIAPVLDETLNPKLLMLLPCMFKCVGHSHVAVRLAASRCIMTMAKSMTVDVMRAVIEN
AIPMLGDVTSVHYRQGAGMLITLVVQGLGVELVPYAPLLVVPLLRCMSDCDHSVRQSVTR
SFAALVPLLPLARGLPPPVGLSEDLSRNAEDAKFLEQLLDSSHIDDYKLFTELKVTLRRY
QQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASEIAECRASNKNTEPHPSLIVCP
STLVGHWAFEIEKYIDASLISTLQYVGSVQDRITLREQFDKHNVVITSYDVVRKDADYLA
QYLWNYCILDEGHIIKSAKSKITLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGF
LGTERQFQASYGKPLVAARDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPE
KIIQDRYCDLSPVQLVLYEQFSGSHVKQEISSMVKTDDSAVAAGGKQTSPKASTHVFQAL
QYLLKLCSHPLLVVGEKVPESLTLQLSELFPTSSDIISELRKLHHSPKLVALQEILEECG
IGVDTSASDAAVTVGQHRVLIFAQHKALLDIIEKDLFQTYMKNVTYLRLDGSVESEKRFD
IVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQRKV
VNVHRLIMRGTLEEKVMSLQRFKLSVANAVINADNASLKTMNTDQLLDLFASAETSKKGA
SASKRSEGSINADPKLMGTGKGLKAILGGLEELWDQSQYTEEYNLSQFLTKLNG
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgaattattttttctattttaagctatcagatttagaaaatgatcttgatttctgtgca
gttgattcttttactgatgatgacagctctgatcatgatgggggccggtggcctttccgt
agttttgtggaacaactcattcttgatatgtttgatcctgtttgggagattcgccatggt
agtgttatggccttgagagaaattttaacgcatcatggtgcttctgtcggagtatatttt
cctgacttgaactcggatgacacactgttccttgaaataaaagatatggatttttcaagt
aaaattaagaaagagagagaaattgatttgaatatgcaagtttcaccagatgaattggag
ccagatatgaagaggccaaaacttgaagatggatcttttccggtgatggacaaaacgatc
actgctggcctgcatggtggctttgatgttgcagttaagattgaggatactgcatggacc
ttgccctcagggcagtttaatggtcaacatgatattagttctatgaagatggagaccgaa
ttatatgaaaatgatgtgatttgccagtctaaagaagctgaagtggaagagcaaaagagt
tactatgaagataaggctgcatttgcaaattcagatgtactgaaagatctccctgaaaat
tgcaaacttaggaacttggttaagctaaccagacattcttggcttaagaattgtgaattt
cttcaggattgtgcaattcgcttcttgtgtgtactatcactagaccgttttggagactat
gtatctgatcaggttgttgctccagtacgagaaacttgtgcacaagcattaggtgctact
tttaagtacatgcacccttcattagtccatgaaactttgaatgtcttgttgcaaatgcag
cgtaggccagaatgggaaattcgtcacggaagccttttgggtatcaaatacttggttgct
gttcgacgggaaatgctgcaagatttgcttggctatgttgttcctgcttgtaaagctgga
ttggaggaccctgatgatgatgtgcgggctgtggctgcagatgctctgatacctgctgca
gctgctattgttgctttaaaaggtcaattgctgcattcaattattatgctgctttgggat
atactacttgatttggatgatctcagtccatccactagcagtgttatgaacctgttggct
gaaatatactcccaagaagatatgatgccgaagataattggtacatcaacagataaggag
aagcagaattttaatctaaatgaagtaattcgtgctgatgaggtgggagaaggaaaagat
ttgcaggaaaatccttacatgttgtctatgttggcaccacgattatggcccttcatgagg
cacagtattacatcagttcgacattcagctatccgtactttggagaggcttcttgaagct
ggatataaaaggagcatttctgagcattctggtaattccttttggccttcttttattctc
ggtgataccctgaggattgtattccaaaacctgcttctagaatccaaccaggaaattctg
cagtgttctgagagggtgtggaggttgcttgtgcagtgcccagttggggacttggaagta
gcagcggcatcctttatgtcgtcctggatagaacttgcaacaactacttttggttcgaca
ttagattctacaaaaatgttttggccagtggcacttcctcgaaagagtcaccatagagcc
gcagctaaaatgaaagctgtgaagcttgagaatgaatcttatggaactattggcgtggat
tctatgagagtagctgtttctcaggaaactaatggggatgcttctgccaacttagtgaag
ataattgtcggcgctgatacagaaatgtctgtaaccaatactagagtcattacggcttca
gcattagggatatttgcatccaagttgcaggcagattctttgcagtacatagttggtcca
ctgtggagtgcactttcctccttgtcaggagttcaaagacaggtggcatctgtgattctt
atttcttggttcaaagagatcaaaagcaaggattcatcgggaaaccaggaaattatgcat
tcttttccagattatcttagaaaatggttgttggatttgctagcatgttctgaccctgca
ttccctacaaaagattcagttctaccttacgccgagttgtcaaggacatatgctaagatg
cgcaatgaagctagtcagttactacatgctgtcgagtcatctggcatgtttgtggatata
ttgtcagcaaggaaatttgatgcacagagcgcaagtgtagatgatgcaatcagttttgct
tctaaattgccattactatctaatgataatgcggggaacgaatcaatgggaaggaatgtt
gatgatatagagtcaacaaaacaatgtcttatagcaacttcaggctatttaaaatgcgtt
cagagtaatttgcatgttacagtgacctccttggtcgccgctgctgttgtctggatgtca
gagctttctgcacgacttaatcctataattttgcctttaatggcatcaattaaaaagaga
acaggtactgaggaaataatgcaacagaaggcagcagaggcacttgcagaacttatatat
cattgcattgctcgtaagcccagcccaaatgataaattaatcaagaatatttgtagtttg
acgtactcggacccttttgagactcctcaagctgcaattatcaattccatggaaattatt
gatgaccaggatttcctctcctttggtactagtttgggaaaaccaaaatcaaaggttcac
atgttagctggtggtgaagatcggtcaagagtggaaggttttatcagcagaagagggtca
gaattagcattgagacatttgtgtgagaagtttggtcctacaatatttgagaaacttccc
aaactctgggattgcattactgaagttcttataccttgcagtccttcagacaatcagcaa
attgtgcaggctgttgaatctataaaagatcctcagatcttgattaataatattcaggtt
gtacgttctattgctccagtgctggatgaaaccctaaaccctaaactgcttatgcttctt
ccttgcatgttcaaatgtgttggtcattcccatgtggcagttagattggctgcttccagg
tgtattatgacaatggccaagtctatgactgtagatgtaatgcgggctgtgattgaaaat
gccattcctatgttgggggatgtgacatctgtccattatagacaaggtgctggcatgctt
attaccttggttgttcaagggttgggtgtggagttggttccatatgcacccttgttagtt
gtcccacttcttaggtgtatgagtgattgtgatcattccgtcagacagagtgtgacacgt
agttttgctgccctagtacctcttcttccattagcaagaggtcttcctccacctgttgga
ctaagtgaagatttatctagaaatgctgaagatgcaaaatttttggagcaactgcttgat
agttctcatattgatgattacaagctcttcactgaattgaaagttacattgaggaggtat
caacaagaaggtataaactggttggcctttttaaaacgtttcaagcttcatggtatccta
tgtgatgatatggggcttggaaagacgcttcaagcatcagcaattgtagcatctgagata
gctgagtgtcgtgcttcaaataagaacacagaacctcatccatccttaattgtttgccca
tcaacccttgtcggacattgggcttttgaaatagaaaaatatattgatgcttctctgata
tccacactccaatatgttggttctgttcaggaccgtatcactttgagagaacaatttgat
aagcataatgttgttataacatcgtatgatgttgtgcgcaaggatgctgattatctagct
caatatctctggaactactgtattttagatgaaggacatatcatcaaaagtgctaaatcc
aaaataacattggcagtaaagcagctgaaagctcagcacaggttaatactaagtggaaca
ccgatccagaacaacatcatggatttgtggtccctttttgacttcctaatgccaggattt
cttggaacggagagacagttccaagccagctatggaaagccgctagtggctgctagagat
cctaaatgttctgcaaaggatgctgaagctggggcacttgctatggaagctttgcacaaa
caggtcatgcccttcctacttcgtcggacaaaagatgaggttttgtcagacctgccagag
aaaatcattcaggacagatactgtgaccttagccctgtccaattagtactttatgaacaa
ttttctggttcacatgtgaaacaagaaatttcaagcatggtaaagacggatgattctgca
gttgcagcaggggggaagcagacttcgccgaaagcatctacacatgtgtttcaggcactg
caatacttgctaaaactttgtagccatccccttcttgtcgttggagaaaaggtccccgag
tcacttacattgcagttgtcagaactcttcccaacgagttcagatattatttctgaactt
cgtaaactccaccactctcccaagttagttgctcttcaggagattctggaagagtgtgga
attggtgtggatacttctgcttctgatgctgctgtcacagttggacaacatagagttctg
atatttgctcaacataaagccttactggatatcatcgaaaaggacttgtttcaaacctac
atgaagaatgtcacatacctacgtctggatggatcagttgagtcagagaagcgttttgac
attgtgaaagctttcaattctgatccgactatagatgtcctgctgcttacaacacatgtt
ggtggacttggtctgaacttgacatcagctgataccctcgtttttatggaacacgattgg
aatccaatgcgtgatcatcaggcaatggacagagcgcatagattaggccaacggaaagtt
gtgaatgtccaccgtctcatcatgcgtggcaccctggaggaaaaagttatgagccttcaa
cggttcaaactatcggttgccaatgccgttatcaatgccgataatgccagtttgaaaacc
atgaacactgaccagttgctcgatctatttgcctctgccgaaacgtctaaaaagggagcc
agcgcttcaaaacgttcagagggcagcatcaatgcagaccctaaattaatgggtacaggg
aagggactaaaagccattcttggtggtttggaggagctttgggatcaatcacaatataca
gaggaatacaatttgagccagtttttaacaaaacttaatggctga
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