Hibiscus syriacus (Rose-of-Sharon): 120165149
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Entry
120165149 CDS
T09559
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120165149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120165149
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
120165149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
120165149
NCBI-ProteinID:
XP_039030662
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MHKKMAFSFPDEVLEHVFSFIQSDKDRNSVSMVCKSWYEIERYCRRKVFVGNCYAVSPRM
VIRRFPEFRSIELKGKPHFADFNLVPDGWGGYVFPWIAEMAGALPWLEEIKLKRMVVTDE
SLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCKNLKELDLRDCEGDDLGWHWLSYFP
DTYTSLVSLNISCLGSDEVSFSALERLVGRCTNLRTLRLNRAVPLDKIANILRHAPQLVE
FGTGSYTADLRPDIYSDLAGAFSSCKELKSLSGFWDVVPAYLPAIYPVCSKLTSLNLSYA
TLQSSDLIKLVSHCPNLQRLLVLDYIEDSGLEALASICNDLQELRVFPSDPFGVEPNVSL
TEQGLVAVSSGCPKLQSVLYFCRQMSNEALVTIAKNRPNFTRFRLCIIEPTTADYLTLEP
LDVGFGAIVQYCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSIAFAGDGDLGLHHVLSG
CESLRKLEIRDCPFGDKALLANAEKLETMRSLWMSSCAVSFGACKLLGQKMPRLNVEVID
ERGPPDSRPESCPVDKLYIYRTLVGPRFDMPPFVWTMEDDPSLQQLSRANLM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcataagaaaatggcgttttcgttcccagatgaggtgctggagcacgtattctcgttc
atacaatcagataaagacaggaactcggtatcgatggtgtgtaaatcgtggtacgagatc
gaacgttattgtcgaaggaaagtattcgtggggaactgttacgctgtgagccctaggatg
gtgatcagacggttcccggagtttagatccattgagctgaaagggaaaccgcacttcgcc
gacttcaatctggtgcccgacggatggggaggttatgtgttcccctggatcgccgagatg
gccggcgctctcccttggctcgaagagattaaacttaaacggatggtcgttaccgacgaa
agtttggagcttattgctaagtcatttaagaacttcaaagtgttggttctttcttcttgt
gaagggttttcaactgatgggcttgctgccattgctgctacttgcaagaatctgaaagag
ctggacttgcgagactgtgaaggggacgatttgggttggcattggctcagttattttccc
gacacatacacgtcacttgtgtctctcaatatttcttgcttaggatccgatgaagttagt
ttctctgccttggagcgcctggtgggtagatgtaccaaccttaggacacttcggctcaac
cgtgcggtgcccctggataagatcgccaacattctacgtcatgcgccgcagctggttgaa
ttcggcactggtagctacacggctgatctacggccggacatctactcggatttggctgga
gcattttctagttgcaaggagctaaagagcttgtctgggttttgggatgtggttccagct
taccttccagccatttaccctgtctgctctaaattaacatcactcaacttgagctatgct
acgcttcaaagttctgatcttatcaagcttgtaagccactgtccgaatttgcaacgccta
ttggtacttgattacattgaagatagtggccttgaagcactcgcatctatttgcaatgat
ttgcaagaattacgtgtgtttccatctgatccatttggtgtagagccaaatgtgtccttg
acggaacagggccttgttgctgtatcttcaggttgtcctaagctacagtcagttctgtac
ttctgccgtcaaatgtctaatgaggcattagtcacgattgccaagaaccgtccgaatttc
acacgttttcgtctttgtataattgagcctacaacagctgattaccttaccctcgagcca
cttgatgttggttttggagccattgttcagtactgcaaggatctccagcgtctttccctc
tctggtctccttacagatcgtgtgttcgaatatattgggacgtatgcgaaaaagctcgag
atgctgtctatagcttttgcgggagatggtgatttgggactccaccatgtgctttctggg
tgtgaaagcctccggaaactagagattagggactgcccctttggcgacaaggcacttttg
gccaatgctgaaaagctggagacaatgcgatccctttggatgtcttcttgcgccgtgagc
ttcggagcatgtaagctgctaggtcagaagatgccgaggttgaatgtagaagttatagat
gagaggggacctccggattcaagaccagaaagctgccctgttgataagctctacatatat
agaacccttgttgggccaaggttcgacatgcctccatttgtttggacaatggaagacgat
ccttcattgcagcagctctctcgagcaaatctcatgtga
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