Hibiscus syriacus (Rose-of-Sharon): 120165299
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Entry
120165299 CDS
T09559
Name
(RefSeq) PH-interacting protein-like
KO
K11797
PH-interacting protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120165299
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120165299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
NBCH_WD40
Bromodomain
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
VPS8_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
120165299
NCBI-ProteinID:
XP_039030782
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MEWKCSSSAAASSLCKAPLNISTTMPEKDLVETNVDIDLREIYFLIMQFLSVGPCQRTFE
LLSKELLEHRLLPRRYHSWFSRSGYHSGNNDDDGISFPLSFNNLVERYPHVEQDHLVKLL
KQLLCTPCSKAVGDAHSLSAADVPTLLGSGSFSLLNSDKSMSNRLGKPMPAYLRWPHMQA
DQVRGLSIREIGGGFRKHHRAPSIRSACYAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFD
RSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNVLVASASNDFVIRVW
HLPDGLPVSVLRGHTAAVTAIAFNPRPAFAFQLLSSSDDGTCRIWEARYSHCSPRIYLPK
PSEAATGSSNFPSNNGPSSSNVPQTHQILCCAFNVNGTVFVTGSSDTFARVWSACKPSTD
DSQQPVHELDVLAGHENDVNYVQFSGCAVPSRSSMSDIIKEDNLPKFKNSWFCQDNIVTC
SRDGSAIIWIPRSRRFHGKVGRWTKAYHLKVPPPPLPPQPLRGGPRQRLLPTPRGVNMIV
WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHVASSYVLDVHPFNPRIAMSAGYDGKT
IVWDIWEGVPIRIYEIGRFKLVDGKFSPDGTSIVLSDEVGQIHLLNTGQGESQMDAKYDQ
FFLGDYRPLIWDSAGNALDQETQSTPHRRNMQDLICDASMIPYPEPYQSMYQKRRLGALG
IEWHPSSTKFAIGPDISLGQDFEMPLLEDLERVIEPLPDFMDAMFWEPENEVISDDTDSE
YNVPEECSTEGEQGALCSSSSRGTESGEEDSEVECSHKDGLRRSRRKKGSPEAASKTSSR
RRVKKRYLDERDGTIPRSSRTKKSKSGRKASKRKSSKAKTVRPQRAQRVAARNARSMMSR
ITVTSTDGDEVDSVGDSLNSESVSQDSSSQNSETERNLETVKLKSIEKDQESEGIVWSHE
LPKSQSDTVNRKRLVLKFSLRDSRKPGASEATRLNTCNQINVPGPSLSGPSVAFDENIND
CLKDPGLTTADVELSEHDRVDLEGTRQTVNTEDHLEKFVGDKDNKIRWEEVKIRTSKRSR
SGDLVPTNVHYENRITSLNREERQLTTTALQDLDRVMMEEVSPDEAHKSLLSLGDHQLNG
SPSASYSNVSLNQGHIGWSGCDKYGNHDSSQTDQVIGVKQSHESNEITPHKSVKLRIRTK
AISRDLGSPSKQKSITIVNDPTCDECDMRPRNTLSATLNLGYSMQEMGEGSDRSRLQHSI
GLNSINDHDSETVFPESAGDADRRTQSMKMKVKVGHAVATTSENDENLSSKGYHGIASEE
WMSSSKHRDRSRSNRTKRSGGHDNNLKFSSGRKLNPSVRKLSWLMVSEQEEGYRYIPQLG
DEVVYFRQGHEECIEQGFIKGTGPWSSWAHLSAVEICRVVDLAYSQVPGSGESCCKIKLR
FVDNSSCAIDEEFTLTLPELIGLPDFLVEKTRYDAALSREWARKNKCLVWWKNSDQEGGD
WWDGRIIASQPKSMDFPDSPWEKYEVIYKDGCKYRHSAWELHDPNTQWAHPHIDCEIRDK
LLSSFDKLERSAGRDKDLYLFQKLNEAAQKSEFLNRFPVPLYPEFIRLRLENNYYRTLEG
VKHDIKIMLSNAKSYFARSAHLSSKMKPLSDWFTKTIAKIARKL
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaagtgttcatcttctgctgctgcatcttctctttgcaaggcacctttaaat
atctcaactacaatgccggagaaggatctggttgagactaatgttgatattgaccttcga
gaaatttacttcttgataatgcaatttctgtcagttggtccttgccagagaacttttgag
ctgttatcaaaggaacttttggaacatcggcttttacccagaagatatcattcttggttt
tcaagaagtggttatcatagtgggaacaatgacgatgatggcatctcattcccattaagt
tttaacaacttagtggaaaggtatcctcatgtcgagcaagatcacttggtaaagcttctg
aagcagctactctgtactccatgcagcaaagctgtaggagatgctcattctctaagtgct
gctgatgtccctacattactgggatctggttccttttcacttttgaattctgacaagagt
atgagtaataggctgggtaagcctatgcctgcctatcttcgttggcctcatatgcaagct
gatcaagttcgtgggttaagtataagagaaattgggggaggcttccggaagcaccaccga
gctccctctattcggtcagcgtgctatgctattgctaaaccatctaccatggtgcaaaag
atgcagaacataaagaagttgagggggcatcggaatgctgtctattgtgccatatttgat
cgctctgggagatacgttattactggttctgatgaccgccttgtcaaaatttggtctatg
gaaactgcgttttgcttggccagctgccgtggacatgaaggtgacataactgacctggct
gttagttcgaacaatgttttggttgcatctgcttccaatgattttgtgatacgagtttgg
cacttgccagatgggttgccagtttcagttctacgaggacatactgcagctgttactgca
attgcatttaaccccaggcctgcatttgctttccagcttttatcgtcatctgatgatggg
acttgccgaatctgggaggccagatattcacattgtagcccacgcatatacctgccgaag
ccttctgaagctgctactgggagtagcaattttccgtctaataatggaccttcctcaagt
aatgtcccacaaactcatcaaatattatgttgtgcatttaacgtcaatgggacagttttt
gtcactggtagctctgacacttttgccagggtctggagtgcctgtaagcctagtaccgat
gattcacaacaaccagttcatgagctggatgttttggctggccatgaaaatgacgttaat
tacgttcaatttagtggatgtgctgtaccttcaagatcctcaatgtctgatatcataaag
gaggacaatcttccaaaatttaaaaactcctggttctgtcaggacaacattgttacctgt
tctcgtgatggtagtgcaataatctggattcccagatcacgtagattccatggaaaagtt
ggacgttggacaaaggcatatcatttgaaagttccaccccccccgctacctcctcaacct
cttcgaggaggcccacgtcagagactcctccctactcctcgtggtgtcaatatgattgtg
tggagccttgataatcgttttgttctagcagctataatggattgcagaatatgcgtgtgg
aatgctgttgatggaagcttggtacattctttgactggtcatgttgcatcatcttatgtt
ttggatgtgcatcctttcaaccctcgaattgcgatgagtgctggatatgatggaaaaact
atagtttgggatatatgggagggcgtacccatccggatatatgaaattgggcgttttaag
ttggttgatgggaagttttctccggatggaacgtcaattgtactttcagatgaagttggg
cagatacatttgcttaacactggccagggtgagtctcaaatggatgccaaatatgatcag
ttctttcttggggattatcgcccccttatttgggattctgctggaaatgctcttgatcag
gagacacagtctaccccacatcgtaggaacatgcaagatcttatttgtgatgccagcatg
attccatacccagaaccttatcagagtatgtaccagaaacggcgacttggcgcactgggt
attgagtggcatccatcttcaacaaagtttgctattggcccagatatcagtttaggccag
gattttgaaatgccactcctggaagatctggaaagagtgatagaacccctacctgatttc
atggatgccatgttttgggaacctgaaaacgaagttatcagtgatgacactgactcggag
tacaatgttcctgaggaatgttctacagaaggtgaacagggggcattgtgttccagctct
tctagaggcacagagagcggtgaagaagacagtgaggttgaatgcagtcacaaagatggt
cttcgtcgatcacgaagaaaaaaaggcagccctgaagctgcgtcgaagacttcatcaagg
agacgagtcaaaaagaggtatttggatgagcgtgatggcactatacccagatccagtaga
actaaaaaatcaaaaagtggcaggaaagcttcaaagaggaagtcttcaaaagcaaagaca
gtgagacctcagagagctcagagggttgctgcacgtaatgctcgaagcatgatgtctaga
atcactgtgacatctacagatggagatgaagtggactcagtaggtgattcattgaatagt
gagtcagtgtctcaagattcaagctctcaaaacagcgaaactgagagaaacttggagact
gtaaaactgaagtccatagaaaaggaccaagagtctgagggcatagtatggtctcatgaa
cttcccaaatcgcaatcagatactgtgaacagaaagagattggtcttaaagttctcctta
cgtgattctaggaagccaggtgcttcagaggccaccagattgaacacttgcaatcagatc
aatgtaccgggtccttctttgtctgggccttcagtagcttttgatgagaatataaatgac
tgcttgaaagaccctggcttaacgactgcagatgtggagctctcagagcatgacagggtt
gatctagaaggtacgaggcaaactgtaaacactgaggatcatttagagaaatttgtaggg
gacaaggataacaaaatcagatgggaagaggttaaaattcggacatccaagcgttcgagg
tcaggagatttggtgccaaccaatgtccactatgaaaacaggattacttctttaaatagg
gaagagagacagttaactactactgcattgcaagatctggacagagtgatgatggaagag
gtttctcccgatgaggcacacaaatctttactgtccctaggtgaccatcaactgaatggc
agtccttcggcatcttattctaatgtcagcctcaaccagggacatataggttggtctggc
tgtgataaatatggaaatcatgactcctcgcaaactgatcaagttattggtgttaaacaa
tctcatgagtcaaatgagattactccacacaaatcagtgaaattaagaataagaacaaaa
gcaatttcaagggaccttggaagtccttccaaacaaaaatccatcactatagtgaatgat
ccaacctgcgatgaatgtgatatgaggcctagaaacactttgtctgctacactaaatctt
ggttacagcatgcaagaaatgggtgaaggttctgacagatctaggttacagcattcaatt
ggcttaaattccattaatgatcatgattcagaaactgtgtttcccgaatcagcaggtgat
gcagatcgccgaacacaatccatgaagatgaaggtaaaagtaggtcatgcagtagcaacg
acatcagaaaatgatgaaaatttatcttcaaaaggataccatggtattgcatctgaagaa
tggatgtcaagttccaaacatagagacagatcaagatccaacagaaccaagcgtagcggt
ggtcatgacaataacttgaaattttcgagtggaaggaagttgaatccttctgttagaaaa
ttatcatggttgatggtgtcagagcaggaagagggttatcgttatatacctcagctgggt
gatgaagttgtatatttcagacaggggcatgaagagtgcatcgaacaaggtttcataaag
gggacaggtccatggagctcatgggcacacctgagtgcagtggaaatttgcagggttgtg
gaccttgcttattcccaagttcctggatctggagagagttgctgtaaaatcaaacttaga
tttgtagataattcatcatgtgcaattgatgaggaattcacattgactttgcctgagttg
ataggccttcctgattttcttgttgaaaagacgagatatgatgctgcattgagtagagaa
tgggctcgtaagaataaatgcctagtatggtggaagaactctgatcaggagggtggagat
tggtgggatggtagaatcattgcttcacagccaaaatctatggatttccctgatagtcct
tgggaaaaatatgaagttatttacaaggatggctgtaaatatcggcacagtgcttgggaa
ctgcatgaccccaacactcaatgggcgcatccacatattgattgtgaaatcagagataag
ctcctgtcttcttttgataaattagagcgttcagcaggcagagataaggatttatattta
tttcagaaactgaacgaagctgctcagaaatcagaatttcttaacaggtttccagttcca
ttgtatcccgaattcatccggcttaggttagagaacaactattatcgaacgttggaaggg
gtgaagcatgacataaagataatgctttcgaatgcgaagagttatttcgctagaagcgct
cacctgtcttcaaagatgaagcctctatcagattggtttacaaagacaattgccaagatt
gcaaggaagctgtaa
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integrated database retrieval system