Hibiscus syriacus (Rose-of-Sharon): 120165497
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Entry
120165497 CDS
T09559
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120165497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120165497
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120165497
Complex C
U4/U6.U5 tri-SnRNP related factors
120165497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120165497
NCBI-ProteinID:
XP_039030931
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGILKHSDSPYIRAIGFLYLRYAGDPKTLWTWFEPYIK
DEEEFSPGSSGRTTTMGVYLRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKMKLPTKTSG
STGDNSRHGSDDTARRPPSVKAALSVSFGQRAPHRATTRDSSPVRRTLPPPPPYDRSNGD
DVRRSPSHRHSQSRDREYSDKDRERERERGREQDRDWDRDRDRQRDRSRDRYRDRDRNRD
RDRDREQRHDYDRRSRYMDKRDTDDSRRYRSRSRDIDDGRRYRSRSRSPSMSGNRSRSQS
EQGGNSHYDPPQKEGSKASSNLAKLRDLYGDTSDTKGDGGGYGRAANRDSSGEEVIRLGG
SSWR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacatgtggtaagccgattgattcgttgttggagaaagtgctttgtatg
aatatactatcctctgattatttcaaagagctttaccgtttaaagacttatcatgaagtc
attgatgaaatttacaatcaagttgatcatgttgagccatggatgactgggaactgtcgt
ggtccttctactgcattctgccttctttacaagtttttcaccatgaaacttactgtcaag
caaatgcatgggatactgaagcactctgattctccttacattagagcaattggattcctc
tacttgaggtatgctggtgatccaaagactttatggacttggtttgaaccatacattaaa
gatgaagaggaattctcccctgggtctagtggacgaacgaccaccatgggggtatacttg
cgtgatttgcttcttggacagtactactttgatactcttttccctcgaatccctgttcct
gtgttgcgtcaggttgtatccaatcttgagaagatgaagctgcctactaagacttctggt
tcaacaggggataatagtcgccatggatctgatgacactgctcgccgcccgccttctgta
aaagctgcactttctgtctcttttggtcagcgtgccccccatcgggcaacaaccagggac
tcttctcctgtgcgtcgcactctaccaccaccaccaccttatgacagatccaatggtgat
gatgtaagaagatctcccagccaccgtcacagccaaagccgtgatagggaatattctgac
aaggatagggaaagggaaagagagaggggcagggaacaagaccgggattgggatcgtgac
cgtgataggcaacgagatagaagcagggaccgatatcgtgaccgtgatcgtaatagggac
agggacagggatagggaacaaaggcatgattatgatcgaaggtcaaggtacatggataaa
cgggacactgatgacagtaggcgttacaggagcagaagccgagacatcgatgacggtaga
cgttacaggagcagaagccgaagtcccagcatgagcggaaacaggagcagaagccagagt
gagcaaggcggcaacagtcattatgatccaccacaaaaggagggaagcaaggcatccagt
aatttggcgaagctgagggatctttacggtgatacaagtgatacaaagggagatggcggt
ggctatggaagggcagcaaacagggacagcagtggagaagaggtgattagactaggtggt
tcttcttggagatag
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