Hibiscus syriacus (Rose-of-Sharon): 120165525
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Entry
120165525 CDS
T09559
Name
(RefSeq) protein TRANSPARENT TESTA 9-like
KO
K19513
protein CLEC16A
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120165525
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120165525
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
120165525
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
120165525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
120165525
NCBI-ProteinID:
XP_039030968
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MSQFLKFEEPIMWLSFWRSRDRFSLDELRYLTNQLQKVQIINEVNKDFVIEALRSIAELL
TYGDQHDPSFFDFFMEKQVMGEFIRILNISKTVTVSLQLLQTISILIQNLRREHAIYYMF
SNEHVNRLITYSFDFRNEEILSYYISFLRAISGKLNKNTISLLVKTEDEEVVSFPLYVEA
IRFAFNEESMIRTAVRSLTLNVYHVEDDFVNKFITSAPHSEYFFKLVSFFRDQCINLSKL
VLEYPKNPCSESVSAILATVDEIEDNLYYFSDVISAGIPVVGSLITDNILQFLILPLLFP
ALQIDADSNLKIGAITSLYLLCCILRVVKIKDLANTVAAAFLYPLEVFAANSEAKINGCV
SGNNRANENEEPHSDSVTPGQLCVDIPNKASSSHVHPEGIIAERSLSRSHFSLRETLLSY
ITDGDDARALGALNVLATLLQTKELDESMLDFLGILPQRKQHKRLLLQALVGEGSGEEQL
FSFEGGSPRDGVSTELDGYLKKLKEQYGVSIVGAGASPRMHKNQVLDALVKLLCRSNIPT
EILWDAGWLLRQLLPYSEAEFKSYHLKLSKDSYRNCRSALLQETKGIWVDVLITVFCDQW
KNCKRAIEASSPRKEPKCILLPFQKLNSEDIPAESSFAAGERMCDLVKVFVLLHQLQMFS
LGRTSPEQPPIHPSIDIPETSRAKAVGLDVLGLKPGTEIRLVHALPCRIAFGRGKERHFH
FLAVSVGTLGWVVLAEELPLKQNYGIVRVAAPLAGTNPIIDDKHSRWLHLRIRPSSLPFL
DPPKSSMPGETRIKSLIDGRWTLAFRDDESCKTAVSMILEEIDLQSTEVERRLKPVLDLE
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttttgaagtttgaggaaccaatcatgtggctatccttttggagatccaga
gatcgattctccttagacgaactcagatatttgacgaaccagctgcagaaagttcaaatt
attaatgaagttaataaggatttcgttattgaggcattgagatctattgcggagttgttg
acatatggcgatcaacatgatccgtccttcttcgattttttcatggagaagcaagtcatg
ggagagttcatacgtatactgaatattagcaaaactgtgacagtttctcttcaattactt
caaacaataagtattttgattcaaaacctaagaagagaacatgccatatactatatgttc
agtaatgaacatgttaaccgcctaataacttattcatttgacttccgcaatgaagagata
ctttcttactatatatcattcttaagagcaataagtgggaagctaaacaagaacacaatt
tctttgcttgtgaaaactgaagatgaagaagtagtttccttcccattgtatgttgaggca
atacggtttgcttttaatgaagaaagcatgatccgcacggcagtgcgttcgctaacactg
aatgtctatcatgttgaagatgattttgtcaataagttcattaccagtgccccacattct
gaatatttttttaaattggtctcatttttccgggatcagtgcatcaatttaagcaaactg
gttctcgaatatccaaaaaacccatgctcggagtcagtctctgcgatacttgctacagtg
gatgaaattgaggacaatctctactattttagtgatgttatctctgctgggattcctgtt
gttgggagtttgataacagacaacattttgcagtttttgatacttcctttgctgtttcca
gcacttcaaatagatgctgacagtaacctgaagataggtgcaatcacttctttgtaccta
ctttgttgcatcttgcgggttgtgaaaatcaaagatctggcgaacaccgttgctgcagct
tttttatatccactggaggtctttgctgctaattctgaagctaaaatcaatggctgtgtt
tctggaaataatcgtgcaaatgaaaatgaagagccacacagtgatagtgttactcctgga
caattatgtgttgatataccaaacaaggctagttcttcacatgttcatcctgaaggcatt
attgcagagaggagtttatctcgttcacatttttctttgagggagactttgctttcttat
atcactgatggagatgatgcacgagccctgggagctttgaatgtgttggctacattgtta
caaacaaaggaattggatgaatcaatgctagattttcttggtattcttccccagcgcaaa
caacacaaaagactcttactgcaagctttggtaggtgagggctcaggtgaagagcaactt
ttttcttttgaaggtggctctccaagagatggtgttagtactgagcttgatggatattta
aaaaagttgaaggaacaatacggagtgtctattgtaggagcaggagcaagtcctcgtatg
cataaaaaccaggttcttgatgcattggtcaagcttctttgtcggtcaaatatacctaca
gaaattttgtgggatgctggttggcttttgcgacaactgcttccttatagtgaggcagag
ttcaaaagctatcatcttaaattgtcgaaggactcgtataggaattgcagaagtgctctt
ctacaggagactaaagggatttgggttgatgtccttataacggtgttttgtgatcagtgg
aaaaactgcaaaagagctattgaggcttcatcccctcgaaaggagcccaagtgcatactt
ttgccatttcagaaattgaattctgaagatattcctgcggaatcatcctttgctgctggt
gagaggatgtgtgatttggtgaaggtatttgtacttcttcatcagcttcaaatgttctcc
cttggtagaacttcgcctgaacagcctcctatccatccttcaattgacatcccagaaaca
tctcgtgccaaggcagttggtctggatgttttaggtctgaagccaggcactgaaataaga
cttgttcatgcactgccttgtcggattgcatttggaaggggcaaagagcgtcatttccat
tttctagcagtttctgtgggcacattgggatgggttgttcttgctgaagagttaccactg
aagcagaattatggcatagttcgtgttgctgctcccttggctggaacaaatcccataata
gatgataagcattcaagatggctacacttgcgtattcgtccatcatcattgcccttcttg
gatcctcctaaatctagcatgcccggtgaaacgaggataaaatctctaatcgacggaaga
tggaccctagctttcagggacgacgaatcctgcaaaaccgctgtatctatgatcctggaa
gagattgatctacaaagcaccgaagtggagagaagactaaaaccggttctcgacctcgaa
ctgtag
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