Hibiscus syriacus (Rose-of-Sharon): 120165604
Help
Entry
120165604 CDS
T09559
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120165604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120165604
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120165604
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120165604
Atg1 complex
120165604
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120165604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120165604
NCBI-ProteinID:
XP_039031015
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MASTHTSSHTEAAKMEQVITEFFYESLFIILESRSPFVSSRNYSGEQTVSSPSSSSSSSS
SVRPRDKWFNLALRECPSALENLDLCRQSNFESVVVDVILEQKPLDWGPASFSPKRDLFG
NLSSKDKNSLFWNSDQEESGREIKSEKIIERWLVLHESRKGRDCNLGNRRSSCYSLSALY
KKLILLWRSLYVTVRLLPAYNIFRDLNSSGQICAFKLVPRVYSFVEPLTRKEEVDMQRFW
FTPVDTSCGRLCVSVLYYSSISDTSSESSTPMSPQFIPNYVGSPLADPLRRFPSLPISHG
SPSSLPFSRRHGWSYDHYKASPPLVSFSPSPTHSESHALVMNLDEYCPSPNFSASPSPSP
SLPIHIPRSHLSEALLRPESAPVDIPGPKVANSPALSDKHKLPPSPPLKITRTGTSRTDN
FRVPAKTGATIEKLFSFEKEDRRKYSGVKISSCGSPRISCSRSSSRSFQDDFDDSEFPCP
FDVEDDEMTNPGSRVESYDKREHPSDINEAGLFVNRKSQDAAVGALVRMLKKAPPLCQDI
SLNFSEASRPEMWSNSIQKQSQISEAATVEHAAALSSASSRLVASKTAADALEELRGYKV
MKNLLLSEGGKAYTSANV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactcatacgagttctcacacagaagcagccaaaatggaacaagttatcact
gaattcttctatgagagtctttttataattcttgaatcgaggtctccttttgtgtcatcg
cgtaattatagcggggaacaaactgtgtcgtctccatcttcatcctcatcctcttcatct
agtgtgagaccaagagataaatggttcaatttagctcttagggagtgcccttcagcgcta
gaaaatcttgacctttgtcggcagagtaattttgagtctgtagttgttgatgttatattg
gagcagaagcctcttgattggggacctgcaagtttttctcccaagagggatctttttggg
aatttgtcttctaaagataagaattcgcttttctggaattctgatcaagaagaatcaggc
agggagataaaaagtgaaaagattatagaaagatggttggtgctgcacgaaagtagaaag
ggtcgggattgtaatttagggaatagaaggtcaagttgttatagtttgagtgcattatat
aagaaattgatattgttgtggaggtccttatatgtgactgtgaggcttttacctgcttac
aacatttttcgtgatctcaattcatctggtcaaatctgtgcctttaagcttgttcctagg
gtatactcttttgttgaacccttgactcgtaaagaagaggttgatatgcagcgattttgg
tttacccctgtggacacatcttgcggtaggctttgtgtttctgttttgtactattcatca
atctcagatacaagctcagaatcgtcaacccctatgtcccctcaatttataccaaattat
gttggaagcccattggcagacccattgaggagatttccatcacttcctatttcacatggc
tctccatcatctttaccattttcaagaaggcatggttggagttatgaccattacaaggct
tcaccacctttggtttctttctcaccatcaccaacacattcggagtcacacgctttggtt
atgaacttagatgagtattgtccttcccccaatttctctgcttccccttccccatcacca
tcactccccatccacatacccagatctcatttatcagaagctcttttacgccctgaaagt
gctcctgttgacataccgggtcctaaggttgctaattcccctgcattgtctgacaagcac
aagttgccaccatcacctccccttaaaattacaagaactggtacttctaggaccgataat
tttagggtacctgctaaaactggtgcaacaattgagaagctgttctcttttgagaaagaa
gaccgtcgaaaatattctggagtgaagatatcttcctgcggttcaccacgaatttcatgt
tctagaagttccagtaggtcttttcaagatgattttgatgactctgagtttccttgccca
tttgatgtggaggatgatgaaatgacgaatcctggtagcagagttgagtcttacgataaa
agagagcatccatccgatataaatgaagctgggttgttcgtgaatagaaaatcccaagat
gctgcagttggtgctcttgtccgtatgctgaaaaaagcccctcctctctgccaggacatc
tcccttaatttttcagaagcctcaaggccagaaatgtggagcaacagcatccaaaagcag
agtcagatctcagaagctgcgactgttgaacatgctgctgctttgagcagtgcatcttcg
aggcttgttgcatcaaagacagctgctgatgcattagaggaacttcggggttacaaagtg
atgaaaaacctgttgcttagtgaagggggtaaggcttacacatctgcaaatgtataa
DBGET
integrated database retrieval system
